MANIFEST.in
README.md
setup.py
CHEWBBACA/__init__.py
CHEWBBACA/chewBBACA.py
CHEWBBACA/CHEWBBACA_NS/__init__.py
CHEWBBACA/CHEWBBACA_NS/down_schema.py
CHEWBBACA/CHEWBBACA_NS/load_schema.py
CHEWBBACA/CHEWBBACA_NS/stats_requests.py
CHEWBBACA/CHEWBBACA_NS/sync_schema.py
CHEWBBACA/PrepExternalSchema/PrepExternalSchema.py
CHEWBBACA/PrepExternalSchema/__init__.py
CHEWBBACA/SchemaEvaluator/CheckCDS.py
CHEWBBACA/SchemaEvaluator/ValidateSchema.py
CHEWBBACA/SchemaEvaluator/__init__.py
CHEWBBACA/SchemaEvaluator/alleleSizeStats.py
CHEWBBACA/allelecall/BBACA.py
CHEWBBACA/allelecall/__init__.py
CHEWBBACA/allelecall/callAlleles_protein3.py
CHEWBBACA/createschema/CreateSchema.py
CHEWBBACA/createschema/PPanGen.py
CHEWBBACA/createschema/__init__.py
CHEWBBACA/createschema/init_schema_4_bbaca.py
CHEWBBACA/prodigal_training_files/Acinetobacter_baumannii.trn
CHEWBBACA/prodigal_training_files/Campylobacter_jejuni.trn
CHEWBBACA/prodigal_training_files/Enterococcus_faecium.trn
CHEWBBACA/prodigal_training_files/Escherichia_coli.trn
CHEWBBACA/prodigal_training_files/Haemophilus_influenzae.trn
CHEWBBACA/prodigal_training_files/Legionella_pneumophila.trn
CHEWBBACA/prodigal_training_files/Listeria_monocytogenes.trn
CHEWBBACA/prodigal_training_files/README.md
CHEWBBACA/prodigal_training_files/Salmonella_enterica.trn
CHEWBBACA/prodigal_training_files/Staphylococcus_aureus.trn
CHEWBBACA/prodigal_training_files/Staphylococcus_haemolyticus.trn
CHEWBBACA/prodigal_training_files/Streptococcus_agalactiae.trn
CHEWBBACA/prodigal_training_files/Streptococcus_canis.trn
CHEWBBACA/prodigal_training_files/Streptococcus_dysgalactiae.trn
CHEWBBACA/prodigal_training_files/Streptococcus_equi.trn
CHEWBBACA/prodigal_training_files/Streptococcus_pneumoniae.trn
CHEWBBACA/prodigal_training_files/Streptococcus_pyogenes.trn
CHEWBBACA/prodigal_training_files/Yersinia_enterocolitica.trn
CHEWBBACA/utils/AutoAlleleCDSCuration.py
CHEWBBACA/utils/AutoAlleleCuration.py
CHEWBBACA/utils/CommonFastaFunctions.py
CHEWBBACA/utils/CountNumberMissingData.py
CHEWBBACA/utils/Create_Genome_Blastdb.py
CHEWBBACA/utils/Extract_cgAlleles.py
CHEWBBACA/utils/ParalogPrunning.py
CHEWBBACA/utils/RemoveGenes.py
CHEWBBACA/utils/RemoveGenomes.py
CHEWBBACA/utils/TestGenomeQuality.py
CHEWBBACA/utils/__init__.py
CHEWBBACA/utils/assemblyStats.py
CHEWBBACA/utils/auxiliary_functions.py
CHEWBBACA/utils/constants.py
CHEWBBACA/utils/determine_paralogs.py
CHEWBBACA/utils/init_schema_4_bbaca.py
CHEWBBACA/utils/parameters_validation.py
CHEWBBACA/utils/profile_joiner.py
CHEWBBACA/utils/runProdigal.py
CHEWBBACA/utils/sqlite_functions.py
CHEWBBACA/utils/uniprot_find.py
chewBBACA.egg-info/PKG-INFO
chewBBACA.egg-info/SOURCES.txt
chewBBACA.egg-info/dependency_links.txt
chewBBACA.egg-info/entry_points.txt
chewBBACA.egg-info/requires.txt
chewBBACA.egg-info/top_level.txt