CHANGELOG
COPYING
MANIFEST.in
README
THANKS
TODO
filter_gcc
setup.py
chemfp/__init__.py
chemfp/_compat.py
chemfp/arena.py
chemfp/argparse.py
chemfp/bitops.py
chemfp/encodings.py
chemfp/fps_io.py
chemfp/fps_search.py
chemfp/io.py
chemfp/openbabel.py
chemfp/openbabel_patterns.py
chemfp/openeye.py
chemfp/openeye_patterns.py
chemfp/pattern_fingerprinter.py
chemfp/rdkit.py
chemfp/rdkit_patterns.py
chemfp/rdmaccs.patterns
chemfp/rdmaccs2.patterns
chemfp/sdf_reader.py
chemfp/search.py
chemfp/slow.py
chemfp/substruct.patterns
chemfp/types.py
chemfp.egg-info/PKG-INFO
chemfp.egg-info/SOURCES.txt
chemfp.egg-info/dependency_links.txt
chemfp.egg-info/entry_points.txt
chemfp.egg-info/top_level.txt
chemfp/commandline/__init__.py
chemfp/commandline/cmdsupport.py
chemfp/commandline/fpcat.py
chemfp/commandline/ob2fps.py
chemfp/commandline/oe2fps.py
chemfp/commandline/rdkit2fps.py
chemfp/commandline/sdf2fps.py
chemfp/commandline/simsearch.py
chemfp/futures/README
chemfp/futures/__init__.py
chemfp/futures/_base.py
chemfp/futures/_compat.py
chemfp/futures/process.py
chemfp/futures/thread.py
chemfp/progressbar/LICENSE.txt
chemfp/progressbar/README.txt
chemfp/progressbar/__init__.py
chemfp/progressbar/compat.py
chemfp/progressbar/widgets.py
docs/Makefile
docs/api.rst
docs/api.txt
docs/apply_template.py
docs/conf.py
docs/index.rst
docs/installing.rst
docs/links.html
docs/tool-help.rst
docs/using-api.rst
docs/using-tools.rst
src/CMakeLists.txt
src/bitops.c
src/chemfp.c
src/chemfp.h
src/chemfp_internal.h
src/cpuid.h
src/fps.c
src/heapq.c
src/heapq.h
src/hits.c
src/popcount.h
src/popcount_SSSE3.c
src/popcount_gillies.c
src/popcount_lauradoux.c
src/popcount_lut.c
src/popcount_popcnt.c
src/pysearch_results.c
src/pysearch_results.h
src/python_api.c
src/search_core.c
src/searches.c
src/select_popcount.c
src/test_libchemfp.c
tests/chebi_queries.fps.gz
tests/chebi_rdmaccs.fps
tests/decoder.sdf
tests/drugs.flush
tests/drugs.smi
tests/everything.fps
tests/fpverify.py
tests/maccs.smi
tests/missing_title.sdf
tests/pubchem.sdf
tests/pubchem.sdf.gz
tests/pubchem.should_be_sdf_but_is_not
tests/queries.fps
tests/queries_incompatible_aromaticity1.fps
tests/queries_incompatible_aromaticity2.fps
tests/queries_incompatible_num_bits.fps
tests/queries_incompatible_num_bytes.fps
tests/queries_incompatible_software.fps
tests/queries_incompatible_type.fps
tests/simple.fps
tests/simple.fps.gz
tests/strange.sdf
tests/support.py
tests/targets.fps
tests/test_align.py
tests/test_api.py
tests/test_chemfp.py
tests/test_contains.py
tests/test_docstrings.py
tests/test_fingerprint_writer.py
tests/test_fpcat.py
tests/test_memory.py
tests/test_metadata.py
tests/test_methods.py
tests/test_ob2fps.py
tests/test_oe2fps.py
tests/test_openeye_patterns.py
tests/test_patterns.py
tests/test_rdkit2fps.py
tests/test_reorder.py
tests/test_sdf2fps.py
tests/test_sdf_reader.py
tests/test_search_results.py
tests/test_similarity.py
tests/test_simsearch.py
tests/test_symmetric.py
tests/test_tox_version.py
tests/test_types.py
tests/tryptophan.sdf
tests/unit2
tests/unittest2/__init__.py
tests/unittest2/__main__.py
tests/unittest2/case.py
tests/unittest2/collector.py
tests/unittest2/compatibility.py
tests/unittest2/loader.py
tests/unittest2/main.py
tests/unittest2/result.py
tests/unittest2/runner.py
tests/unittest2/signals.py
tests/unittest2/suite.py
tests/unittest2/util.py