AUTHORS
CHANGELOG.md
CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
requirements.txt
setup.cfg
setup.py
chanjo/__init__.py
chanjo/calculate.py
chanjo/exc.py
chanjo/sambamba.py
chanjo/sex.py
chanjo/testutils.py
chanjo.egg-info/PKG-INFO
chanjo.egg-info/SOURCES.txt
chanjo.egg-info/dependency_links.txt
chanjo.egg-info/entry_points.txt
chanjo.egg-info/not-zip-safe
chanjo.egg-info/requires.txt
chanjo.egg-info/top_level.txt
chanjo/cli/__init__.py
chanjo/cli/base.py
chanjo/cli/calculate.py
chanjo/cli/db.py
chanjo/cli/init.py
chanjo/cli/load.py
chanjo/cli/sambamba.py
chanjo/cli/sex.py
chanjo/init/__init__.py
chanjo/init/bootstrap.py
chanjo/init/demo.py
chanjo/init/demo-files/hgnc.min.bed
chanjo/init/demo-files/sample1.coverage.bed
chanjo/init/demo-files/sample2.coverage.bed
chanjo/init/demo-files/sample3.coverage.bed
chanjo/load/__init__.py
chanjo/load/link.py
chanjo/load/sambamba.py
chanjo/load/utils.py
chanjo/load/parse/__init__.py
chanjo/load/parse/bed.py
chanjo/load/parse/sambamba.py
chanjo/store/__init__.py
chanjo/store/api.py
chanjo/store/constants.py
chanjo/store/delete.py
chanjo/store/fetch.py
chanjo/store/models.py
tests/conftest.py
tests/test_calculate.py
tests/test_sambamba.py
tests/test_sex.py
tests/cli/test_cli_base.py
tests/cli/test_cli_calculate.py
tests/cli/test_cli_init.py
tests/cli/test_cli_load.py
tests/cli/test_cli_sambamba.py
tests/cli/test_cli_sex.py
tests/cli/test_cli_store.py
tests/fixtures/ccds-mini.bed
tests/fixtures/ccds-mini.sorted.bam
tests/fixtures/ccds-mini.sorted.bam.bai
tests/fixtures/sambamba.depth.bed
tests/init/test_init_bootstrap.py
tests/init/test_init_demo.py
tests/load/test_load_link.py
tests/load/test_load_sambamba.py
tests/load/test_load_utils.py
tests/load/parse/test_load_parse_bed.py
tests/load/parse/test_load_parse_sambamba.py
tests/store/test_store_api.py
tests/store/test_store_models.py