LICENSE.txt
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
src/cgelib/__init__.py
src/cgelib.egg-info/PKG-INFO
src/cgelib.egg-info/SOURCES.txt
src/cgelib.egg-info/dependency_links.txt
src/cgelib.egg-info/requires.txt
src/cgelib.egg-info/top_level.txt
src/cgelib/alignment/__init__.py
src/cgelib/alignment/aligner.py
src/cgelib/alignment/read_alignment.py
src/cgelib/alignment/KMA/__init__.py
src/cgelib/alignment/KMA/alignment_files.py
src/cgelib/alignment/KMA/read_files.py
src/cgelib/alignment/blast/__init__.py
src/cgelib/alignment/blast/alignment_files.py
src/cgelib/alignment/blast/read_files.py
src/cgelib/applications/Blast.py
src/cgelib/applications/KMA.py
src/cgelib/applications/__init__.py
src/cgelib/applications/command.py
src/cgelib/output/__init__.py
src/cgelib/output/exceptions.py
src/cgelib/output/parserdict.py
src/cgelib/output/result.py
src/cgelib/output/valueparsers.py
src/cgelib/output/templates_json/beone/beone.json
src/cgelib/output/templates_json/beone/example.json
src/cgelib/output/test_data/__init__.py
src/cgelib/output/test_data/test_val_parse_fail.py
src/cgelib/sequence/Feature.py
src/cgelib/sequence/SeqHit.py
src/cgelib/sequence/__init__.py
src/cgelib/utils/__init__.py
src/cgelib/utils/file_mixin.py
src/cgelib/utils/format_mixin.py
src/cgelib/utils/loaders_mixin.py
src/cgelib/utils/pliers_mixin.py
src/cgelib/utils/savers_mixin.py
src/cgelib/utils/transformer_mixin.py