[CGATReport.plugins]
render-pie-plot = CGATReportPlugins.Plotter:PiePlot
transform-stats = CGATReportPlugins.Transformer:TransformerStats
transform-test-mwu = CGATReportPlugins.Transformer:TransformerMannWhitneyU
render-bar-plot = CGATReportPlugins.Plotter:BarPlot
render-violin-plot = CGATReportPlugins.Plotter:ViolinPlot
transform-contingency = CGATReportPlugins.Transformer:TransformerContingency
render-venn-plot = CGATReportPlugins.Plotter:VennPlot
render-dataframe = CGATReportPlugins.Renderer:DataFrame
render-debug = CGATReportPlugins.Renderer:Debug
render-stacked-bar-plot = CGATReportPlugins.Plotter:StackedBarPlot
render-r-smooth-scatter-plot = CGATReportPlugins.RPlotter:SmoothScatterPlot
bokeh = CGATReportPlugins.BokehPlugin:BokehPlugin
rplot = CGATReportPlugins.RPlotPlugin:RPlotPlugin
render-box-plot = CGATReportPlugins.Plotter:BoxPlot
transform-histogram = CGATReportPlugins.Transformer:TransformerHistogram
html = CGATReportPlugins.HTMLPlugin:HTMLPlugin
render-scatter-plot = CGATReportPlugins.Plotter:ScatterPlot
transform-correlation = CGATReportPlugins.Transformer:TransformerCorrelationPearson
render-b-line-plot = CGATReportPlugins.BokehPlotter:LinePlot
render-matrix-plot = CGATReportPlugins.Plotter:TableMatrixPlot
render-interleaved-bar-plot = CGATReportPlugins.Plotter:InterleavedBarPlot
render-histogram-plot = CGATReportPlugins.Plotter:HistogramPlot
render-matrix = CGATReportPlugins.Renderer:TableMatrix
transform-odds-ratio = CGATReportPlugins.TransformersGeneLists:TransformerOddsRatio
transform-pearson = CGATReportPlugins.Transformer:TransformerCorrelationPearson
render-scatter-rainbow-plot = CGATReportPlugins.Plotter:ScatterPlotWithColor
render-hinton-plot = CGATReportPlugins.Plotter:HintonPlot
render-ggplot = CGATReportPlugins.GGPlotter:GGPlot
render-line-plot = CGATReportPlugins.Plotter:LinePlot
matplotlib = CGATReportPlugins.MatplotlibPlugin:MatplotlibPlugin
transform-filter = CGATReportPlugins.Transformer:TransformerFilter
render-rst-table = CGATReportPlugins.Renderer:RstTable
render-gallery-plot = CGATReportPlugins.Plotter:GalleryPlot
render-r-heatmap-plot = CGATReportPlugins.RPlotter:HeatmapPlot
rst = CGATReportPlugins.RSTPlugin:RSTPlugin
transform-melt = CGATReportPlugins.Transformer:TransformerMelt
transform-aggregate = CGATReportPlugins.Transformer:TransformerAggregate
render-xls-table = CGATReportPlugins.Renderer:XlsTable
transform-venn = CGATReportPlugins.TransformersGeneLists:TransformerVenn
transform-p-adjust = CGATReportPlugins.TransformersGeneLists:TransformerMultiTest
render-html-table = CGATReportPlugins.Renderer:HTMLTable
render-r-line-plot = CGATReportPlugins.RPlotter:LinePlot
render-status = CGATReportPlugins.Renderer:Status
render-user = CGATReportPlugins.Renderer:User
render-matrixNP-plot = CGATReportPlugins.Plotter:NumpyMatrixPlot
transform-hypergeometric = CGATReportPlugins.TransformersGeneLists:TransformerHypergeometric
render-density-plot = CGATReportPlugins.Plotter:DensityPlot
render-matrixNP = CGATReportPlugins.Renderer:NumpyMatrix
render-r-box-plot = CGATReportPlugins.RPlotter:BoxPlot
transform-spearman = CGATReportPlugins.Transformer:TransformerCorrelationSpearman
render-glossary-table = CGATReportPlugins.Renderer:GlossaryTable
xls = CGATReportPlugins.XLSPlugin:XLSPlugin
render-r-ggplot = CGATReportPlugins.RPlotter:GGPlot
render-table = CGATReportPlugins.Renderer:Table

[console_scripts]
cgatreport-quickstart = CGATReport.quickstart:main
cgatreport-serve = CGATReport.serve:main
cgatreport-profile = CGATReport.profile:main
cgatreport-clean = CGATReport.clean:main
cgatreport-build = CGATReport.build:main
cgatreport-get = CGATReport.get:main
cgatreport-test = CGATReport.test:main

[distutils.commands]
build_sphinx = cgatreport.setup_command:BuildDoc

