INSTALL
KNOWN_BUGS
LICENSE
MANIFEST.in
README.rst
THANKS.txt
setup.py
cgat_daisy.egg-info/PKG-INFO
cgat_daisy.egg-info/SOURCES.txt
cgat_daisy.egg-info/dependency_links.txt
cgat_daisy.egg-info/entry_points.txt
cgat_daisy.egg-info/not-zip-safe
cgat_daisy.egg-info/top_level.txt
daisy/__init__.py
daisy/combinations.py
daisy/storage.py
daisy/toolkit.py
daisy/version.py
daisy/workflow.py
daisy/tasks/AssemblyMetrics.py
daisy/tasks/AssemblyTools.py
daisy/tasks/BAMMetrics.py
daisy/tasks/BAMTools.py
daisy/tasks/BEDMetrics.py
daisy/tasks/BEDTools.py
daisy/tasks/CollateRunner.py
daisy/tasks/FASTAMetrics.py
daisy/tasks/FASTATools.py
daisy/tasks/FASTQMetrics.py
daisy/tasks/GATKRunner.py
daisy/tasks/GWASTools.py
daisy/tasks/LDSC.py
daisy/tasks/MetricRunner.py
daisy/tasks/ONT.py
daisy/tasks/RTGMetrics.py
daisy/tasks/Runner.py
daisy/tasks/SimulateReads.py
daisy/tasks/SplitRunner.py
daisy/tasks/ToolRunner.py
daisy/tasks/Utils.py
daisy/tasks/VCFCollate.py
daisy/tasks/VCFMetrics.py
daisy/tasks/VCFSplit.py
daisy/tasks/VCFTools.py
daisy/tasks/VariantCallers.py
daisy/tasks/__init__.py
daisy/tasks/defaults.yml
daisy/tasks/test_task_library.yml
daisy/tools/__init__.py
daisy/tools/benchmark_purge.py
daisy/tools/benchmark_rename_files.py
daisy/tools/benchmark_simple.py
daisy/tools/benchmark_upload.py
daisy/tools/check_task_library.py
daisy/tools/cli.py
daisy/tools/compare_chars.py
daisy/tools/compare_lengths.py
daisy/tools/merge_databases.py
daisy/tools/modify_string.py
daisy/tools/profile_chain.py
daisy/tools/revert_string.py
daisy/tools/run_task.py
daisy/tools/test_task_library.py
daisy/tools/watch_and_run.py