MANIFEST.in
README.md
requirements.txt
setup.py
cg/__init__.py
cg/constants.py
cg/exc.py
cg.egg-info/PKG-INFO
cg.egg-info/SOURCES.txt
cg.egg-info/dependency_links.txt
cg.egg-info/entry_points.txt
cg.egg-info/not-zip-safe
cg.egg-info/requires.txt
cg.egg-info/top_level.txt
cg/apps/__init__.py
cg/apps/gt.py
cg/apps/hk.py
cg/apps/loqus.py
cg/apps/osticket.py
cg/apps/scoutapi.py
cg/apps/stats.py
cg/apps/coverage/__init__.py
cg/apps/coverage/api.py
cg/apps/coverage/omim.py
cg/apps/invoice/__init__.py
cg/apps/invoice/render.py
cg/apps/lims/__init__.py
cg/apps/lims/api.py
cg/apps/lims/order.py
cg/apps/lims/orderform.py
cg/apps/tb/__init__.py
cg/apps/tb/add.py
cg/apps/tb/api.py
cg/cli/__init__.py
cg/cli/add.py
cg/cli/analysis.py
cg/cli/base.py
cg/cli/status.py
cg/cli/store.py
cg/cli/transfer.py
cg/cli/upload.py
cg/meta/__init__.py
cg/meta/analysis.py
cg/meta/invoice.py
cg/meta/orders/__init__.py
cg/meta/orders/api.py
cg/meta/orders/lims.py
cg/meta/orders/schema.py
cg/meta/orders/status.py
cg/meta/transfer/__init__.py
cg/meta/transfer/flowcell.py
cg/meta/transfer/lims.py
cg/meta/upload/__init__.py
cg/meta/upload/coverage.py
cg/meta/upload/gt.py
cg/meta/upload/observations.py
cg/meta/upload/scoutapi.py
cg/server/__init__.py
cg/server/admin.py
cg/server/api.py
cg/server/app.py
cg/server/auto.py
cg/server/config.py
cg/server/ext.py
cg/store/__init__.py
cg/store/models.py
cg/store/utils.py
cg/store/api/__init__.py
cg/store/api/add.py
cg/store/api/core.py
cg/store/api/find.py
cg/store/api/status.py
tests/.DS_Store
tests/conftest.py
tests/apps/lims/conftest.py
tests/apps/lims/test_apps_lims_orderform.py
tests/delivery/.DS_Store
tests/delivery/conftest.py
tests/delivery/test_delivery.py
tests/fixtures/.DS_Store
tests/fixtures/DEMUX/160219_D00410_0217_AHJKMYBCXX/Unaligned5/Project_337334/Sample_ADM1136A3_XTC08/ADM1136A3_XTC08_AGTGGTCA_L001_R1_001.fastq.gz
tests/fixtures/DEMUX/160219_D00410_0217_AHJKMYBCXX/Unaligned5/Project_337334/Sample_ADM1136A3_XTC08/ADM1136A3_XTC08_AGTGGTCA_L001_R2_001.fastq.gz
tests/fixtures/DEMUX/160219_D00410_0217_AHJKMYBCXX/Unaligned5/Project_337334/Sample_ADM1136A3_XTC08/ADM1136A3_XTC08_AGTGGTCA_L002_R1_001.fastq.gz
tests/fixtures/DEMUX/160219_D00410_0217_AHJKMYBCXX/Unaligned5/Project_337334/Sample_ADM1136A3_XTC08/ADM1136A3_XTC08_AGTGGTCA_L002_R2_001.fastq.gz
tests/fixtures/analysis/sample_coverage.bed
tests/fixtures/orderforms/1508.12.fastq.xlsx
tests/fixtures/orderforms/1508.12.scout.xlsx
tests/fixtures/orderforms/1541.6.external.xlsx
tests/fixtures/orderforms/1604.5.rml.xlsx
tests/fixtures/orders/external.json
tests/fixtures/orders/fastq.json
tests/fixtures/orders/rml.json
tests/fixtures/orders/scout.json
tests/meta/conftest.py
tests/meta/test_meta_analysis.py
tests/meta/orders/conftest.py
tests/meta/orders/test_meta_orders_api.py
tests/meta/orders/test_meta_orders_lims.py
tests/meta/orders/test_meta_orders_status.py
tests/meta/transfer/conftest.py
tests/meta/transfer/test_meta_transfer_flowcell.py
tests/store/conftest.py
tests/store/test_store_api_status.py