README.md
setup.py
cg_lims/__init__.py
cg_lims/exceptions.py
cg_lims/objects.py
cg_lims/options.py
cg_lims/status_db_api.py
cg_lims.egg-info/PKG-INFO
cg_lims.egg-info/SOURCES.txt
cg_lims.egg-info/dependency_links.txt
cg_lims.egg-info/entry_points.txt
cg_lims.egg-info/top_level.txt
cg_lims/EPPs/__init__.py
cg_lims/EPPs/base.py
cg_lims/EPPs/arnold/__init__.py
cg_lims/EPPs/arnold/base.py
cg_lims/EPPs/arnold/prep.py
cg_lims/EPPs/arnold/sample.py
cg_lims/EPPs/files/__init__.py
cg_lims/EPPs/files/base.py
cg_lims/EPPs/files/file_to_udf.py
cg_lims/EPPs/files/csv_for_kapa_truble_shooting/__init__.py
cg_lims/EPPs/files/csv_for_kapa_truble_shooting/csv_for_kapa_debug.py
cg_lims/EPPs/files/csv_for_kapa_truble_shooting/models.py
cg_lims/EPPs/files/hamilton/__init__.py
cg_lims/EPPs/files/hamilton/base.py
cg_lims/EPPs/files/hamilton/make_kapa_csv.py
cg_lims/EPPs/files/hamilton/models.py
cg_lims/EPPs/files/hamilton/normalization_file.py
cg_lims/EPPs/files/hamilton/sars_cov2_prep_file.py
cg_lims/EPPs/files/placement_map/__init__.py
cg_lims/EPPs/files/placement_map/hmtl_templates.py
cg_lims/EPPs/files/placement_map/make_96well_placement_map.py
cg_lims/EPPs/files/placement_map/models.py
cg_lims/EPPs/files/pooling_map/__init__.py
cg_lims/EPPs/files/pooling_map/hmtl_templates.py
cg_lims/EPPs/files/pooling_map/make_pooling_map.py
cg_lims/EPPs/files/pooling_map/models.py
cg_lims/EPPs/move/__init__.py
cg_lims/EPPs/move/base.py
cg_lims/EPPs/move/move_samples.py
cg_lims/EPPs/move/place_samples_in_seq_agg.py
cg_lims/EPPs/move/rerun_samples.py
cg_lims/EPPs/qc/__init__.py
cg_lims/EPPs/qc/base.py
cg_lims/EPPs/qc/set_qc_fail.py
cg_lims/EPPs/udf/__init__.py
cg_lims/EPPs/udf/base.py
cg_lims/EPPs/udf/calculate/__init__.py
cg_lims/EPPs/udf/calculate/base.py
cg_lims/EPPs/udf/calculate/calculate_amount_ng.py
cg_lims/EPPs/udf/calculate/calculate_beads.py
cg_lims/EPPs/udf/calculate/calculate_water.py
cg_lims/EPPs/udf/calculate/calculate_water_volume_rna.py
cg_lims/EPPs/udf/calculate/get_missing_reads.py
cg_lims/EPPs/udf/calculate/molar_concentration.py
cg_lims/EPPs/udf/calculate/sum_missing_reads_in_pool.py
cg_lims/EPPs/udf/calculate/twist_aliquot_amount.py
cg_lims/EPPs/udf/calculate/twist_aliquot_volume.py
cg_lims/EPPs/udf/calculate/twist_get_volumes_from_buffer.py
cg_lims/EPPs/udf/calculate/twist_pool.py
cg_lims/EPPs/udf/calculate/twist_qc_amount.py
cg_lims/EPPs/udf/copy/__init__.py
cg_lims/EPPs/udf/copy/artifact_to_sample.py
cg_lims/EPPs/udf/copy/base.py
cg_lims/EPPs/udf/copy/process_to_sample.py
cg_lims/EPPs/udf/copy/reads_to_sequence.py
cg_lims/EPPs/udf/copy/sample_to_artifact.py
cg_lims/EPPs/udf/set/__init__.py
cg_lims/EPPs/udf/set/base.py
cg_lims/EPPs/udf/set/set_samples_reads_missing.py
cg_lims/commands/__init__.py
cg_lims/commands/base.py
cg_lims/files/__init__.py
cg_lims/files/manage_csv_files.py
cg_lims/get/__init__.py
cg_lims/get/artifacts.py
cg_lims/get/fields.py
cg_lims/get/files.py
cg_lims/get/ids.py
cg_lims/get/samples.py
cg_lims/get/udfs.py
cg_lims/models/__init__.py
cg_lims/models/context.py
cg_lims/models/api/__init__.py
cg_lims/models/api/sample.py
cg_lims/models/api/master_steps/__init__.py
cg_lims/models/api/master_steps/aliquot_samples_for_enzymatic_fragmentation_twist.py
cg_lims/models/api/master_steps/base_step.py
cg_lims/models/api/master_steps/bead_purification_twist_v2.py
cg_lims/models/api/master_steps/buffer_exchange_v2.py
cg_lims/models/api/master_steps/capture_and_wash_twist_v2.py
cg_lims/models/api/master_steps/hybridize_library_twist_v2.py
cg_lims/models/api/master_steps/kapa_library_preparation_twist_v1.py
cg_lims/models/api/master_steps/pool_samples_twist_v2.py
cg_lims/models/arnold/__init__.py
cg_lims/models/arnold/sample.py
cg_lims/models/arnold/sequencing.py
cg_lims/models/arnold/prep/__init__.py
cg_lims/models/arnold/prep/base_step.py
cg_lims/models/arnold/prep/microbial_prep/__init__.py
cg_lims/models/arnold/prep/microbial_prep/buffer_exchange.py
cg_lims/models/arnold/prep/microbial_prep/microbial_library_prep_nextera.py
cg_lims/models/arnold/prep/microbial_prep/normailzation_of_microbial_samples_for_sequencing.py
cg_lims/models/arnold/prep/microbial_prep/normalization_of_microbial_samples.py
cg_lims/models/arnold/prep/microbial_prep/post_pcr_bead_purification.py
cg_lims/models/arnold/prep/microbial_prep/reception_control.py
cg_lims/models/arnold/prep/sars_cov_2_prep/__init__.py
cg_lims/models/arnold/prep/sars_cov_2_prep/library_preparation.py
cg_lims/models/arnold/prep/sars_cov_2_prep/pooling_and_cleanup.py
cg_lims/models/arnold/prep/sars_cov_2_prep/reception_control.py
cg_lims/models/arnold/prep/twist/__init__.py
cg_lims/models/arnold/prep/twist/aliquot_samples_for_enzymatic_fragmentation_twist.py
cg_lims/models/arnold/prep/twist/amplify_captured_libraries.py
cg_lims/models/arnold/prep/twist/bead_purification_twist.py
cg_lims/models/arnold/prep/twist/buffer_exchange.py
cg_lims/models/arnold/prep/twist/capture_and_wash_twist.py
cg_lims/models/arnold/prep/twist/enzymatic_fragmentation_twist.py
cg_lims/models/arnold/prep/twist/hybridize_library_twist.py
cg_lims/models/arnold/prep/twist/kapa_library_preparation_twist.py
cg_lims/models/arnold/prep/twist/pool_samples_twist.py
cg_lims/models/arnold/prep/twist/reception_control.py
cg_lims/models/arnold/prep/wgs/__init__.py
cg_lims/models/arnold/prep/wgs/aliquot_sampels_for_covaris.py
cg_lims/models/arnold/prep/wgs/endrepair_size_selection_a_tailing_adapter_ligation.py
cg_lims/models/arnold/prep/wgs/fragment_dna_truseq_dna.py
cg_lims/models/arnold/prep/wgs/reception_control.py
cg_lims/put/__init__.py
cg_lims/put/queue.py
tests/__init__.py
tests/conftest.py
tests/get/__init__.py
tests/get/test_artifacts.py
tests/get/test_udfs.py