Metadata-Version: 2.4
Name: cen_detect_hor
Version: 0.0.3
Summary: Library to characterise tandem repeats in genomic sequences in terms of evolutionary relationships, looking for so called higher-order-repeats. It has been pecifically designed to analyse non-coding centromeric high-repetition regions of chromosomes.
Project-URL: Documentation, https://github.com/CENdetectHOR/CENdetectHOR_lib#readme
Project-URL: Issues, https://github.com/CENdetectHOR/CENdetectHOR_lib/issues
Project-URL: Source, https://github.com/CENdetectHOR/CENdetectHOR_lib
Author-email: Miguel Ceriani <miguel.ceriani@gmail.com>
License-Expression: MIT
License-File: LICENSE
Classifier: Development Status :: 4 - Beta
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Programming Language :: Python :: 3.11
Classifier: Programming Language :: Python :: 3.12
Requires-Python: >=3.9
Requires-Dist: biopython>=1.84
Requires-Dist: editdistance>=0.8.1
Requires-Dist: matplotlib>=3.9.2
Requires-Dist: numpy>=2.0.2
Requires-Dist: scikit-learn>=1.5.2
Requires-Dist: typing-extensions>=4.12.2
Description-Content-Type: text/markdown

# CENdetectHOR Library (cen_detect_hor)

[![PyPI - Version](https://img.shields.io/pypi/v/cen_detect_hor.svg)](https://pypi.org/project/cen_detect_hor)
[![PyPI - Python Version](https://img.shields.io/pypi/pyversions/cen_detect_hor.svg)](https://pypi.org/project/cen_detect_hor)

Library to characterise tandem repeats in genomic sequences in terms of evolutionary relationships, looking for so called higher-order-repeats (HORs).
It has been specifically designed to analyse non-coding centromeric high-repetition regions of chromosomes. 

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## Table of Contents

- [Installation](#installation)
- [License](#license)

## Installation

```console
pip install cen_detect_hor
```

## License

`cen_detect_hor` is distributed under the terms of the [MIT](https://spdx.org/licenses/MIT.html) license.
