.gitignore
CHANGELOG.md
LICENSE
README.md
requirements.txt
setup.py
cellex/__init__.py
cellex/esobject.py
cellex/summarydata.py
cellex.egg-info/PKG-INFO
cellex.egg-info/SOURCES.txt
cellex.egg-info/dependency_links.txt
cellex.egg-info/requires.txt
cellex.egg-info/top_level.txt
cellex/metrics/__init__.py
cellex/metrics/det.py
cellex/metrics/ep.py
cellex/metrics/es_mu.py
cellex/metrics/es_sd.py
cellex/metrics/esw_star.py
cellex/metrics/ges.py
cellex/metrics/nsi.py
cellex/plotting/__init__.py
cellex/plotting/gene_profile.py
cellex/plotting/heatmap.py
cellex/plotting/n_es_genes.py
cellex/plotting/save_as_pdf.py
cellex/preprocessing/__init__.py
cellex/preprocessing/anova.py
cellex/preprocessing/log_normalize.py
cellex/preprocessing/remove_non_expressed.py
cellex/utils/__init__.py
cellex/utils/compute_pvalues.py
cellex/utils/parse_input.py
cellex/utils/mapping/__init__.py
cellex/utils/mapping/ens_human_to_symbol.py
cellex/utils/mapping/ens_mouse_to_ens_human.py
cellex/utils/mapping/mgi_mouse_to_ens_mouse.py
cellex/utils/mapping/maps/GRCh38.ens_v90.ensembl2gene_name_version.txt.gz
cellex/utils/mapping/maps/Mus_musculus.GRCm38.90.gene_name_version2ensembl.txt.gz
cellex/utils/mapping/maps/hsapiens_mmusculus_unique_orthologs.GRCh37.ens_v91.txt.gz
docs/README.md
docs/tutorials/demo_moca_100k.ipynb
docs/tutorials/demo_mousebrain_vascular_cells.ipynb
tests/test_recreate_benchmark.py
tests/_benchmark/mousebrain_subset.det.esw.csv.gz
tests/_benchmark/mousebrain_subset.det.esw_null.csv.gz
tests/_benchmark/mousebrain_subset.det.esw_s.csv.gz
tests/_benchmark/mousebrain_subset.det.pvals.csv.gz
tests/_benchmark/mousebrain_subset.ep.esw.csv.gz
tests/_benchmark/mousebrain_subset.ep.esw_null.csv.gz
tests/_benchmark/mousebrain_subset.ep.esw_s.csv.gz
tests/_benchmark/mousebrain_subset.ep.pvals.csv.gz
tests/_benchmark/mousebrain_subset.esmu.csv.gz
tests/_benchmark/mousebrain_subset.essd.csv.gz
tests/_benchmark/mousebrain_subset.ges.esw.csv.gz
tests/_benchmark/mousebrain_subset.ges.esw_null.csv.gz
tests/_benchmark/mousebrain_subset.ges.esw_s.csv.gz
tests/_benchmark/mousebrain_subset.ges.pvals.csv.gz
tests/_benchmark/mousebrain_subset.nsi.esw.csv.gz
tests/_benchmark/mousebrain_subset.nsi.esw_null.csv.gz
tests/_benchmark/mousebrain_subset.nsi.esw_s.csv.gz
tests/_benchmark/mousebrain_subset.nsi.pvals.csv.gz
tests/_benchmark/zeisel2018_mousebrain_subset_data.csv.gz
tests/_benchmark/zeisel2018_mousebrain_subset_metadata.csv.gz