"""
camcops_server/alembic/versions/0029_elixhauserci.py

===============================================================================

    Copyright (C) 2012, University of Cambridge, Department of Psychiatry.
    Created by Rudolf Cardinal (rnc1001@cam.ac.uk).

    This file is part of CamCOPS.

    CamCOPS is free software: you can redistribute it and/or modify
    it under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.

    CamCOPS is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
    GNU General Public License for more details.

    You should have received a copy of the GNU General Public License
    along with CamCOPS. If not, see <https://www.gnu.org/licenses/>.

===============================================================================

DATABASE REVISION SCRIPT

elixhauserci

Revision ID: 0029
Revises: 0028
Creation date: 2019-06-28 15:28:50.861016

"""

# =============================================================================
# Imports
# =============================================================================

from alembic import op
import sqlalchemy as sa

from camcops_server.cc_modules.cc_sqla_coltypes import (
    PendulumDateTimeAsIsoTextColType,
    SemanticVersionColType,
)


# =============================================================================
# Revision identifiers, used by Alembic.
# =============================================================================

revision = "0029"
down_revision = "0028"
branch_labels = None
depends_on = None


# =============================================================================
# The upgrade/downgrade steps
# =============================================================================


# noinspection PyPep8,PyTypeChecker
def upgrade() -> None:
    # ### commands auto generated by Alembic - please adjust! ###
    op.create_table(
        "elixhauserci",
        sa.Column(
            "congestive_heart_failure",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "cardiac_arrhythmias",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "valvular_disease",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "pulmonary_circulation_disorders",
            sa.Boolean(name=op.f("ck_elixhauserci_pulm_circ")),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "peripheral_vascular_disorders",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "hypertension_uncomplicated",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "hypertension_complicated",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "paralysis",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "other_neurological_disorders",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "chronic_pulmonary_disease",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "diabetes_uncomplicated",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "diabetes_complicated",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "hypothyroidism",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "renal_failure",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "liver_disease",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "peptic_ulcer_disease_exc_bleeding",
            sa.Boolean(name=op.f("ck_elixhauserci_peptic")),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "aids_hiv",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "lymphoma",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "metastatic_cancer",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "solid_tumor_without_metastasis",
            sa.Boolean(name=op.f("ck_elixhauserci_tumour_no_mets")),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "rheumatoid_arthritis_collagen_vascular_diseases",
            sa.Boolean(name=op.f("ck_elixhauserci_ra_cvd")),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "coagulopathy",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "obesity",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "weight_loss",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "fluid_electrolyte_disorders",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "blood_loss_anemia",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "deficiency_anemia",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "alcohol_abuse",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "drug_abuse",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "psychoses",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "depression",
            sa.Boolean(),
            nullable=True,
            comment="Disease present (0 no, 1 yes)",
        ),
        sa.Column(
            "patient_id",
            sa.Integer(),
            nullable=False,
            comment="(TASK) Foreign key to patient.id (for this device/era)",
        ),
        sa.Column(
            "clinician_specialty",
            sa.Text(),
            nullable=True,
            comment=(
                "(CLINICIAN) Clinician's specialty (e.g. Liaison Psychiatry)"
            ),
        ),
        sa.Column(
            "clinician_name",
            sa.Text(),
            nullable=True,
            comment="(CLINICIAN) Clinician's name (e.g. Dr X)",
        ),
        sa.Column(
            "clinician_professional_registration",
            sa.Text(),
            nullable=True,
            comment=(
                "(CLINICIAN) Clinician's professional registration (e.g. GMC#"
                " 12345)"
            ),
        ),
        sa.Column(
            "clinician_post",
            sa.Text(),
            nullable=True,
            comment="(CLINICIAN) Clinician's post (e.g. Consultant)",
        ),
        sa.Column(
            "clinician_service",
            sa.Text(),
            nullable=True,
            comment=(
                "(CLINICIAN) Clinician's service (e.g. Liaison Psychiatry"
                " Service)"
            ),
        ),
        sa.Column(
            "clinician_contact_details",
            sa.Text(),
            nullable=True,
            comment=(
                "(CLINICIAN) Clinician's contact details (e.g. bleep,"
                " extension)"
            ),
        ),
        sa.Column(
            "when_created",
            PendulumDateTimeAsIsoTextColType(length=32),
            nullable=False,
            comment=(
                "(TASK) Date/time this task instance was created (ISO 8601)"
            ),
        ),
        sa.Column(
            "when_firstexit",
            PendulumDateTimeAsIsoTextColType(length=32),
            nullable=True,
            comment=(
                "(TASK) Date/time of the first exit from this task (ISO 8601)"
            ),
        ),
        sa.Column(
            "firstexit_is_finish",
            sa.Boolean(),
            nullable=True,
            comment=(
                "(TASK) Was the first exit from the task because it was"
                " finished (1)?"
            ),
        ),
        sa.Column(
            "firstexit_is_abort",
            sa.Boolean(),
            nullable=True,
            comment=(
                "(TASK) Was the first exit from this task because it was"
                " aborted (1)?"
            ),
        ),
        sa.Column(
            "editing_time_s",
            sa.Float(),
            nullable=True,
            comment="(TASK) Time spent editing (s)",
        ),
        sa.Column(
            "_pk",
            sa.Integer(),
            autoincrement=True,
            nullable=False,
            comment="(SERVER) Primary key (on the server)",
        ),
        sa.Column(
            "_device_id",
            sa.Integer(),
            nullable=False,
            comment="(SERVER) ID of the source tablet device",
        ),
        sa.Column(
            "_era",
            sa.String(length=32),
            nullable=False,
            comment=(
                "(SERVER) 'NOW', or when this row was preserved and removed"
                " from the source device (UTC ISO 8601)"
            ),
        ),
        sa.Column(
            "_current",
            sa.Boolean(),
            nullable=False,
            comment="(SERVER) Is the row current (1) or not (0)?",
        ),
        sa.Column(
            "_when_added_exact",
            PendulumDateTimeAsIsoTextColType(length=32),
            nullable=True,
            comment="(SERVER) Date/time this row was added (ISO 8601)",
        ),
        sa.Column(
            "_when_added_batch_utc",
            sa.DateTime(),
            nullable=True,
            comment=(
                "(SERVER) Date/time of the upload batch that added this row"
                " (DATETIME in UTC)"
            ),
        ),
        sa.Column(
            "_adding_user_id",
            sa.Integer(),
            nullable=True,
            comment="(SERVER) ID of user that added this row",
        ),
        sa.Column(
            "_when_removed_exact",
            PendulumDateTimeAsIsoTextColType(length=32),
            nullable=True,
            comment=(
                "(SERVER) Date/time this row was removed, i.e. made not"
                " current (ISO 8601)"
            ),
        ),
        sa.Column(
            "_when_removed_batch_utc",
            sa.DateTime(),
            nullable=True,
            comment=(
                "(SERVER) Date/time of the upload batch that removed this row"
                " (DATETIME in UTC)"
            ),
        ),
        sa.Column(
            "_removing_user_id",
            sa.Integer(),
            nullable=True,
            comment="(SERVER) ID of user that removed this row",
        ),
        sa.Column(
            "_preserving_user_id",
            sa.Integer(),
            nullable=True,
            comment="(SERVER) ID of user that preserved this row",
        ),
        sa.Column(
            "_forcibly_preserved",
            sa.Boolean(),
            nullable=True,
            comment=(
                "(SERVER) Forcibly preserved by superuser (rather than"
                " normally preserved by tablet)?"
            ),
        ),
        sa.Column(
            "_predecessor_pk",
            sa.Integer(),
            nullable=True,
            comment="(SERVER) PK of predecessor record, prior to modification",
        ),
        sa.Column(
            "_successor_pk",
            sa.Integer(),
            nullable=True,
            comment=(
                "(SERVER) PK of successor record  (after modification) or NULL"
                " (whilst live, or after deletion)"
            ),
        ),
        sa.Column(
            "_manually_erased",
            sa.Boolean(),
            nullable=True,
            comment="(SERVER) Record manually erased (content destroyed)?",
        ),
        sa.Column(
            "_manually_erased_at",
            PendulumDateTimeAsIsoTextColType(length=32),
            nullable=True,
            comment="(SERVER) Date/time of manual erasure (ISO 8601)",
        ),
        sa.Column(
            "_manually_erasing_user_id",
            sa.Integer(),
            nullable=True,
            comment="(SERVER) ID of user that erased this row manually",
        ),
        sa.Column(
            "_camcops_version",
            SemanticVersionColType(length=147),
            nullable=True,
            comment="(SERVER) CamCOPS version number of the uploading device",
        ),
        sa.Column(
            "_addition_pending",
            sa.Boolean(),
            nullable=False,
            comment="(SERVER) Addition pending?",
        ),
        sa.Column(
            "_removal_pending",
            sa.Boolean(),
            nullable=True,
            comment="(SERVER) Removal pending?",
        ),
        sa.Column(
            "_group_id",
            sa.Integer(),
            nullable=False,
            comment="(SERVER) ID of group to which this record belongs",
        ),
        sa.Column(
            "id",
            sa.Integer(),
            nullable=False,
            comment="(TASK) Primary key (task ID) on the tablet device",
        ),
        sa.Column(
            "when_last_modified",
            PendulumDateTimeAsIsoTextColType(length=32),
            nullable=True,
            comment=(
                "(STANDARD) Date/time this row was last modified on the source"
                " tablet device (ISO 8601)"
            ),
        ),
        sa.Column(
            "_move_off_tablet",
            sa.Boolean(),
            nullable=True,
            comment="(SERVER/TABLET) Record-specific preservation pending?",
        ),
        sa.ForeignKeyConstraint(
            ["_adding_user_id"],
            ["_security_users.id"],
            name=op.f("fk_elixhauserci__adding_user_id"),
        ),
        sa.ForeignKeyConstraint(
            ["_device_id"],
            ["_security_devices.id"],
            name=op.f("fk_elixhauserci__device_id"),
        ),
        sa.ForeignKeyConstraint(
            ["_group_id"],
            ["_security_groups.id"],
            name=op.f("fk_elixhauserci__group_id"),
        ),
        sa.ForeignKeyConstraint(
            ["_manually_erasing_user_id"],
            ["_security_users.id"],
            name=op.f("fk_elixhauserci__manually_erasing_user_id"),
        ),
        sa.ForeignKeyConstraint(
            ["_preserving_user_id"],
            ["_security_users.id"],
            name=op.f("fk_elixhauserci__preserving_user_id"),
        ),
        sa.ForeignKeyConstraint(
            ["_removing_user_id"],
            ["_security_users.id"],
            name=op.f("fk_elixhauserci__removing_user_id"),
        ),
        sa.PrimaryKeyConstraint("_pk", name=op.f("pk_elixhauserci")),
        mysql_charset="utf8mb4 COLLATE utf8mb4_unicode_ci",
        mysql_engine="InnoDB",
        mysql_row_format="DYNAMIC",
    )
    with op.batch_alter_table("elixhauserci", schema=None) as batch_op:
        batch_op.create_index(
            batch_op.f("ix_elixhauserci__current"), ["_current"], unique=False
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci__device_id"),
            ["_device_id"],
            unique=False,
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci__era"), ["_era"], unique=False
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci__group_id"),
            ["_group_id"],
            unique=False,
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci__pk"), ["_pk"], unique=False
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci_id"), ["id"], unique=False
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci_patient_id"),
            ["patient_id"],
            unique=False,
        )
        batch_op.create_index(
            batch_op.f("ix_elixhauserci_when_last_modified"),
            ["when_last_modified"],
            unique=False,
        )


def downgrade() -> None:
    op.drop_table("elixhauserci")
