from .qc import qc_metrics, _is_integerish
from .normalize import set_raw_counts, normalize_cpm, log1p
from .hvg import highly_variable_genes
from .filter import filter_genes, filter_samples
from .batch import batch_correct_combat
from .sanitize import (
      sanitize_metadata, find_bad_obs_columns,
      find_bad_obs_cols_by_write, make_obs_h5ad_safe_strict,
      find_bad_var_cols_by_write, make_var_h5ad_safe_strict,
      ) 

from .obs import standardize_tcga_obs, obs_map_categories

__all__ = ["qc_metrics", "_is_integerish",
           "set_raw_counts", "normalize_cpm", "log1p",
           "highly_variable_genes", "filter_genes", "filter_samples",
           "batch_correct_combat",
           "sanitize_metadata", "find_bad_obs_columns",
           "find_bad_obs_cols_by_write", "make_obs_h5ad_safe_strict",
           "find_bad_var_cols_by_write", "make_var_h5ad_safe_strict",
           "standardize_tcga_obs", "obs_map_categories",
          ]