
cff-version: 1.2.0
message: If you use this software, please cite it using these metadata.
title: brainreg-napari
authors:
- family-names: "Tyson"
  given-names: "A."
- family-names: "Vélez-Fort"
  given-names: "M."
- family-names: "Rousseau"
  given-names: "C."
- family-names: "Cossell"
  given-names: "L."
- family-names: "Tsitoura"
  given-names: " C."
- family-names: "Lenzi"
  given-names: " S."
- family-names: "Obenhaus"
  given-names: "H."
- family-names: "Claudi"
  given-names: "F."
- family-names: "Branco"
  given-names: "T."
- family-names: "Margrie"
  given-names: "T."
url: https://github.com/brainglobe/brainreg-napari
preferred-citation:
    type: article
    title: Accurate determination of marker location within whole-brain microscopy images
    journal: Scientific Reports
    volume: 12
    pages: 867
    doi: 10.1038/s41598-021-04676-9
    year: 2022
    date-published: 2022-01-18
    authors:
      - family-names: "Tyson"
        given-names: "A."
      - family-names: "Vélez-Fort"
        given-names: "M."
      - family-names: "Rousseau"
        given-names: "C."
      - family-names: "Cossell"
        given-names: "L."
      - family-names: "Tsitoura"
        given-names: " C."
      - family-names: "Lenzi"
        given-names: "S."
      - family-names: "Obenhaus"
        given-names: "H."
      - family-names: "Claudi"
        given-names: "F."
      - family-names: "Branco"
        given-names: "T."
      - family-names: "Margrie"
        given-names: "T."
references:
  - type: article
    title: AMAP is a validated pipeline for registration and segmentation of high-resolution mouse brain data
    journal: Nature Communications
    volume: 7
    pages: 1-9
    doi: 10.1038/ncomms11879
    year: 2016
    date-published: 2016-07-07
    authors:
      - family-names: "Niedworok"
        given-names: "C."
      - family-names: "Brown"
        given-names: "A."
      - family-names: "Jorge"
        given-names: "M."
      - family-names: "Osten"
        given-names: "P."
      - family-names: "Ourselin"
        given-names: "S."
      - family-names: "Modat"
        given-names: "M."
      - family-names: "Margrie"
        given-names: "T."
references:
  - type: article
    title: BrainGlobe Atlas API a common interface for neuroanatomical atlases
    journal: Journal of Open Source Software
    volume: 5
    pages: 2668
    doi: 10.21105/joss.02668
    year: 2020
    date-published: 2020-09-04
    authors:
      - family-names: "Claudi"
        given-names: "F."
      - family-names: "Petrucco"
        given-names: "L."
      - family-names: "Tyson"
        given-names: "A."
      - family-names: "Branco"
        given-names: "T."
      - family-names: "Margrie"
        given-names: "T."
      - family-names: "Portugues"
        given-names: "R."
