AUTHORS.rst
CONTRIBUTING.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
setup.cfg
setup.py
docs/Makefile
docs/authors.rst
docs/bonndit.michi.rst
docs/bonndit.rst
docs/conf.py
docs/contributing.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/readme.rst
docs/usage.rst
docs/_build/html/_static/ajax-loader.gif
docs/_build/html/_static/comment-bright.png
docs/_build/html/_static/comment-close.png
docs/_build/html/_static/comment.png
docs/_build/html/_static/down-pressed.png
docs/_build/html/_static/down.png
docs/_build/html/_static/file.png
docs/_build/html/_static/minus.png
docs/_build/html/_static/plus.png
docs/_build/html/_static/up-pressed.png
docs/_build/html/_static/up.png
scripts/kurtosis
scripts/mtdeconv
scripts/stdeconv
src/bonndit/__init__.py
src/bonndit/base.py
src/bonndit/constants.py
src/bonndit/dki.py
src/bonndit/gradients.py
src/bonndit/io.py
src/bonndit/multivoxel.py
src/bonndit/shdeconv.py
src/bonndit/shoredeconv.py
src/bonndit.egg-info/PKG-INFO
src/bonndit.egg-info/SOURCES.txt
src/bonndit.egg-info/dependency_links.txt
src/bonndit.egg-info/not-zip-safe
src/bonndit.egg-info/requires.txt
src/bonndit.egg-info/top_level.txt
src/bonndit/michi/__init__.py
src/bonndit/michi/dwmri.py
src/bonndit/michi/esh.py
src/bonndit/michi/fields.py
src/bonndit/michi/mmath.py
src/bonndit/michi/nrrd.py
src/bonndit/michi/shore.py
src/bonndit/michi/storage.py
src/bonndit/michi/tensor.py
src/bonndit/michi/vector.py
tests/__init__.py
tests/constants.py
tests/test_DkiFit.py
tests/test_DkiModel.py
tests/test_ShResponse.py
tests/test_ShResponseEstimator.py
tests/test_ShoreFitMt.py
tests/test_ShoreModelMt.py
tests/test_bonndit.py
tests/test_gradients.py
tests/test_io.py
tests/data/bvals
tests/data/bvecs
tests/data/data.nii.gz
tests/data/dti_FA.nii.gz
tests/data/dti_V1.nii.gz
tests/data/fast_pve_0.nii.gz
tests/data/fast_pve_1.nii.gz
tests/data/fast_pve_2.nii.gz
tests/data/mask.nii.gz
tests/data/sh_response_complete.npz
tests/data/shore_response_complete.npz
tests/data/results/cs_deconvolution/odf_hpsd_delta.nrrd
tests/data/results/cs_deconvolution/odf_hpsd_rank1.nrrd
tests/data/results/cs_deconvolution/odf_none_delta.nrrd
tests/data/results/cs_deconvolution/odf_none_rank1.nrrd
tests/data/results/cs_deconvolution/odf_nonneg_delta.nrrd
tests/data/results/cs_deconvolution/odf_nonneg_rank1.nrrd
tests/data/results/cs_deconvolution/response.npz
tests/data/results/cs_deconvolution/wm_hpsd_delta.nrrd
tests/data/results/cs_deconvolution/wm_hpsd_rank1.nrrd
tests/data/results/cs_deconvolution/wm_none_delta.nrrd
tests/data/results/cs_deconvolution/wm_none_rank1.nrrd
tests/data/results/cs_deconvolution/wm_nonneg_delta.nrrd
tests/data/results/cs_deconvolution/wm_nonneg_rank1.nrrd
tests/data/results/dki/da.nii
tests/data/results/dki/dm.nii
tests/data/results/dki/dr.nii
tests/data/results/dki/fa.nii
tests/data/results/dki/ka.nii
tests/data/results/dki/kappaAxial.nii
tests/data/results/dki/kappaDiamond.nii
tests/data/results/dki/kappaRadial.nii
tests/data/results/dki/km.nii
tests/data/results/dki/kr.nii
tests/data/results/dki/kurtosis_fit.npz
tests/data/results/kurtosis/da.nii
tests/data/results/kurtosis/dm.nii
tests/data/results/kurtosis/dr.nii
tests/data/results/kurtosis/fa.nii
tests/data/results/kurtosis/ka.nii
tests/data/results/kurtosis/kappaAxial.nii
tests/data/results/kurtosis/kappaDiamond.nii
tests/data/results/kurtosis/kappaRadial.nii
tests/data/results/kurtosis/km.nii
tests/data/results/kurtosis/kr.nii
tests/data/results/kurtosis/kurtosis_fit.nii
tests/data/results/shore_deconvolution/csf_hpsd_delta.nrrd
tests/data/results/shore_deconvolution/csf_hpsd_rank1.nrrd
tests/data/results/shore_deconvolution/csf_none_delta.nrrd
tests/data/results/shore_deconvolution/csf_none_rank1.nrrd
tests/data/results/shore_deconvolution/csf_nonneg_delta.nrrd
tests/data/results/shore_deconvolution/csf_nonneg_rank1.nrrd
tests/data/results/shore_deconvolution/gm_hpsd_delta.nrrd
tests/data/results/shore_deconvolution/gm_hpsd_rank1.nrrd
tests/data/results/shore_deconvolution/gm_none_delta.nrrd
tests/data/results/shore_deconvolution/gm_none_rank1.nrrd
tests/data/results/shore_deconvolution/gm_nonneg_delta.nrrd
tests/data/results/shore_deconvolution/gm_nonneg_rank1.nrrd
tests/data/results/shore_deconvolution/odf_hpsd_delta.nrrd
tests/data/results/shore_deconvolution/odf_hpsd_rank1.nrrd
tests/data/results/shore_deconvolution/odf_none_delta.nrrd
tests/data/results/shore_deconvolution/odf_none_rank1.nrrd
tests/data/results/shore_deconvolution/odf_nonneg_delta.nrrd
tests/data/results/shore_deconvolution/odf_nonneg_rank1.nrrd
tests/data/results/shore_deconvolution/response.npz
tests/data/results/shore_deconvolution/wm_hpsd_delta.nrrd
tests/data/results/shore_deconvolution/wm_hpsd_rank1.nrrd
tests/data/results/shore_deconvolution/wm_none_delta.nrrd
tests/data/results/shore_deconvolution/wm_none_rank1.nrrd
tests/data/results/shore_deconvolution/wm_nonneg_delta.nrrd
tests/data/results/shore_deconvolution/wm_nonneg_rank1.nrrd