MANIFEST.in
README.md
license.md
setup.py
boimmg.egg-info/PKG-INFO
boimmg.egg-info/SOURCES.txt
boimmg.egg-info/dependency_links.txt
boimmg.egg-info/requires.txt
boimmg.egg-info/top_level.txt
boimmgpy/README.md
boimmgpy/__init__.py
boimmgpy/definitions.py
boimmgpy/test.py
boimmgpy/case_studies/TestLipids.py
boimmgpy/case_studies/__init__.py
boimmgpy/case_studies/compare_models.py
boimmgpy/case_studies/tests.py
boimmgpy/case_studies/redundant_representation_case/__init__.py
boimmgpy/case_studies/redundant_representation_case/map_ecoli_model.py
boimmgpy/case_studies/redundant_representation_case/redundant_representation_case_case_study.py
boimmgpy/case_studies/simple_representation_case/__init__.py
boimmgpy/case_studies/simple_representation_case/simple_representation_case.py
boimmgpy/configs/compounds_annotation_configs.conf
boimmgpy/configs/database_settings.conf
boimmgpy/configs/databases_files_settings.conf
boimmgpy/configs/generic_compounds_exceptions.conf
boimmgpy/configs/reactions_annotation_configs.conf
boimmgpy/configs/tool_configs.conf
boimmgpy/database/__init__.py
boimmgpy/database/boimmg_properties.py
boimmgpy/database/databases_babel.py
boimmgpy/database/accessors/__init__.py
boimmgpy/database/accessors/compounds_database_accessor.py
boimmgpy/database/accessors/compounds_rest_accessor.py
boimmgpy/database/accessors/reactions_database_accessor.py
boimmgpy/database/containers/__init__.py
boimmgpy/database/containers/compound_node.py
boimmgpy/database/interfaces/__init__.py
boimmgpy/database/interfaces/boimmg_database_accessor.py
boimmgpy/database/interfaces/node.py
boimmgpy/id_converters/__init__.py
boimmgpy/id_converters/compounds_id_converter.py
boimmgpy/id_converters/compounds_id_converter_scraper.py
boimmgpy/id_converters/id_converter.py
boimmgpy/id_converters/reactions_id_converter.py
boimmgpy/id_converters/reactions_id_converter_scraper.py
boimmgpy/kegg/__init__.py
boimmgpy/kegg/kegg_compound.py
boimmgpy/kegg/kegg_entity.py
boimmgpy/kegg/kegg_module.py
boimmgpy/kegg/kegg_pathway.py
boimmgpy/kegg/kegg_reaction.py
boimmgpy/model_seed/__init__.py
boimmgpy/model_seed/model_seed_compound.py
boimmgpy/model_seed/model_seed_compounds_database.py
boimmgpy/model_seed/model_seed_compounds_db_scraper.py
boimmgpy/model_seed/model_seed_reaction.py
boimmgpy/model_seed/model_seed_reactions_database.py
boimmgpy/model_seed/model_seed_reactions_database_scraper.py
boimmgpy/models/__init__.py
boimmgpy/models/correct_comparison_between_e_coli_models.py
boimmgpy/ontology_generators/__init__.py
boimmgpy/ontology_generators/ontology_generator.py
boimmgpy/ontology_generators/side_chain_checker.py
boimmgpy/ontology_generators/split_molecule.py
boimmgpy/required_files/biochemistry/Aliases/OtherAliases_compounds.txt
boimmgpy/required_files/biochemistry/Aliases/OtherAliases_reactions.txt
boimmgpy/required_files/biochemistry/Aliases/Unique_ModelSEED_Compound_Aliases.txt
boimmgpy/service/__init__.py
boimmgpy/service/model_mapper.py
boimmgpy/service/interfaces/__init__.py
boimmgpy/service/interfaces/representation_problem_solver.py
boimmgpy/service/network_handlers/__init__.py
boimmgpy/service/network_handlers/graph.py
boimmgpy/service/network_handlers/metabolic_network.py
boimmgpy/service/network_handlers/pathway_handler.py
boimmgpy/service/network_modifiers/__init__.py
boimmgpy/service/network_modifiers/granulator.py
boimmgpy/service/network_modifiers/metabolite_swapper.py
boimmgpy/service/network_modifiers/reactions_swapper.py
boimmgpy/service/representation_problem_solvers/__init__.py
boimmgpy/service/representation_problem_solvers/representation_redundant_case_solver.py
boimmgpy/service/representation_problem_solvers/representation_simple_case_solver.py
boimmgpy/service/revisor/__init__.py
boimmgpy/service/revisor/compounds_revisor.py
boimmgpy/tests/__init__.py
boimmgpy/tests/test_case_study.py
boimmgpy/tests/test_rest_access.py
boimmgpy/utilities/__init__.py
boimmgpy/utilities/annotation_utils.py
boimmgpy/utilities/chemo_utilities.py
boimmgpy/utilities/file_utilities.py
boimmgpy/utilities/model_utilities.py
boimmgpy/utilities/rest_access_utils.py