README.md
setup.py
boimmg.egg-info/PKG-INFO
boimmg.egg-info/SOURCES.txt
boimmg.egg-info/dependency_links.txt
boimmg.egg-info/requires.txt
boimmg.egg-info/top_level.txt
case_studies/TestLipids.py
case_studies/__init__.py
case_studies/compare_models.py
case_studies/tests.py
case_studies/redundant_representation_case/__init__.py
case_studies/redundant_representation_case/map_ecoli_model.py
case_studies/redundant_representation_case/redundant_representation_case_case_study.py
case_studies/simple_representation_case/__init__.py
case_studies/simple_representation_case/simple_representation_case.py
database/__init__.py
database/boimmg_properties.py
database/databases_babel.py
database/accessors/__init__.py
database/accessors/compounds_database_accessor.py
database/accessors/compounds_rest_accessor.py
database/accessors/reactions_database_accessor.py
database/containers/__init__.py
database/containers/compound_node.py
database/interfaces/__init__.py
database/interfaces/boimmg_database_accessor.py
database/interfaces/node.py
id_converters/__init__.py
id_converters/compounds_id_converter.py
id_converters/compounds_id_converter_scraper.py
id_converters/id_converter.py
id_converters/reactions_id_converter.py
id_converters/reactions_id_converter_scraper.py
kegg/__init__.py
kegg/kegg_compound.py
kegg/kegg_entity.py
kegg/kegg_module.py
kegg/kegg_pathway.py
kegg/kegg_reaction.py
model_seed/__init__.py
model_seed/model_seed_compound.py
model_seed/model_seed_compounds_database.py
model_seed/model_seed_compounds_db_scraper.py
model_seed/model_seed_reaction.py
model_seed/model_seed_reactions_database.py
model_seed/model_seed_reactions_database_scraper.py
models/__init__.py
models/correct_comparison_between_e_coli_models.py
ontology_generators/__init__.py
ontology_generators/ontology_generator.py
ontology_generators/side_chain_checker.py
ontology_generators/split_molecule.py
service/__init__.py
service/model_mapper.py
service/interfaces/__init__.py
service/interfaces/representation_problem_solver.py
service/network_handlers/__init__.py
service/network_handlers/graph.py
service/network_handlers/metabolic_network.py
service/network_handlers/pathway_handler.py
service/network_modifiers/__init__.py
service/network_modifiers/granulator.py
service/network_modifiers/metabolite_swapper.py
service/network_modifiers/reactions_swapper.py
service/representation_problem_solvers/__init__.py
service/representation_problem_solvers/representation_redundant_case_solver.py
service/representation_problem_solvers/representation_simple_case_solver.py
service/revisor/__init__.py
service/revisor/compounds_revisor.py
tests/__init__.py
tests/test_case_study.py
tests/test_rest_access.py
utilities/__init__.py
utilities/annotation_utils.py
utilities/chemo_utilities.py
utilities/file_utilities.py
utilities/model_utilities.py