.gitignore
.gitlab-ci.yml
.readthedocs.yaml
AUTHORS.txt
CHANGELOG.rst
CONTRIBUTING.rst
LICENSE.txt
MANIFEST.in
README.rst
pyproject.toml
setup.py
tox.ini
.github/workflows/publish-sdist.yml
.github/workflows/run-tox.yml
doc/Makefile
doc/source/api.rst
doc/source/changelog.rst
doc/source/components.rst
doc/source/conf.py
doc/source/configuration.rst
doc/source/features.rst
doc/source/index.rst
doc/source/installation.rst
doc/source/migration.rst
doc/source/notebooks.rst
doc/source/usage.rst
doc/source/_images/BlueETL.jpeg
doc/source/data/analysis/config.yaml
doc/source/data/circuit/circuit_config.json
doc/source/data/circuit/node_sets.json
doc/source/data/circuit/networks/edges/thalamus_neurons__thalamus_neurons__chemical/edges.h5
doc/source/data/circuit/networks/edges/thalamus_neurons__thalamus_neurons__electrical_synapse/edges.h5
doc/source/data/circuit/networks/nodes/thalamus_neurons/nodes.h5
doc/source/data/simulation-campaign/config.json
doc/source/data/simulation-campaign/0/simulation_config.json
doc/source/data/simulation-campaign/0/reporting/populations_offset.dat
doc/source/data/simulation-campaign/0/reporting/spikes.h5
doc/source/data/simulation-campaign/1/simulation_config.json
doc/source/data/simulation-campaign/1/reporting/populations_offset.dat
doc/source/data/simulation-campaign/1/reporting/spikes.h5
doc/source/migration/0.2.0.rst
doc/source/migration/0.3.0.rst
doc/source/migration/0.9.0.rst
doc/source/migration/automatic.rst
doc/source/notebooks/01_core_transformations.ipynb
doc/source/notebooks/02_features_basics.ipynb
doc/source/notebooks/03_simulation_campaign.ipynb
src/blueetl/__init__.py
src/blueetl/_version.py
src/blueetl/analysis.py
src/blueetl/cache.py
src/blueetl/constants.py
src/blueetl/features.py
src/blueetl/parallel.py
src/blueetl/repository.py
src/blueetl/resolver.py
src/blueetl/types.py
src/blueetl/utils.py
src/blueetl/validation.py
src/blueetl.egg-info/PKG-INFO
src/blueetl.egg-info/SOURCES.txt
src/blueetl.egg-info/dependency_links.txt
src/blueetl.egg-info/entry_points.txt
src/blueetl.egg-info/requires.txt
src/blueetl.egg-info/top_level.txt
src/blueetl/adapters/__init__.py
src/blueetl/adapters/base.py
src/blueetl/adapters/circuit.py
src/blueetl/adapters/node_sets.py
src/blueetl/adapters/simulation.py
src/blueetl/adapters/impl/__init__.py
src/blueetl/adapters/impl/bluepy/__init__.py
src/blueetl/adapters/impl/bluepy/circuit.py
src/blueetl/adapters/impl/bluepy/simulation.py
src/blueetl/adapters/impl/bluepysnap/__init__.py
src/blueetl/adapters/impl/bluepysnap/circuit.py
src/blueetl/adapters/impl/bluepysnap/node_sets.py
src/blueetl/adapters/impl/bluepysnap/simulation.py
src/blueetl/adapters/interfaces/__init__.py
src/blueetl/adapters/interfaces/circuit.py
src/blueetl/adapters/interfaces/node_sets.py
src/blueetl/adapters/interfaces/simulation.py
src/blueetl/apps/__init__.py
src/blueetl/apps/convert.py
src/blueetl/apps/main.py
src/blueetl/apps/migrate.py
src/blueetl/apps/run.py
src/blueetl/apps/validate.py
src/blueetl/campaign/__init__.py
src/blueetl/campaign/config.py
src/blueetl/campaign/utils.py
src/blueetl/config/__init__.py
src/blueetl/config/analysis.py
src/blueetl/config/analysis_model.py
src/blueetl/converters/__init__.py
src/blueetl/converters/convert_spikes.py
src/blueetl/external/__init__.py
src/blueetl/external/bluecv/__init__.py
src/blueetl/external/bluecv/comparison.py
src/blueetl/external/bluecv/gid.py
src/blueetl/external/bluecv/neuron_class.py
src/blueetl/external/bluecv/utils.py
src/blueetl/external/bnac/__init__.py
src/blueetl/external/bnac/calculate_features.py
src/blueetl/external/bnac/calculate_trial_step.py
src/blueetl/external/soma/__init__.py
src/blueetl/external/soma/calculate_features.py
src/blueetl/extract/__init__.py
src/blueetl/extract/base.py
src/blueetl/extract/compartment_report.py
src/blueetl/extract/feature.py
src/blueetl/extract/neuron_classes.py
src/blueetl/extract/neurons.py
src/blueetl/extract/report.py
src/blueetl/extract/simulations.py
src/blueetl/extract/soma_report.py
src/blueetl/extract/spikes.py
src/blueetl/extract/windows.py
src/blueetl/schemas/__init__.py
src/blueetl/schemas/analysis_config.yaml
src/blueetl/store/__init__.py
src/blueetl/store/base.py
src/blueetl/store/feather.py
src/blueetl/store/hdf.py
src/blueetl/store/parquet.py
tests/__init__.py
tests/functional/__init__.py
tests/functional/conftest.py
tests/functional/test_analysis.py
tests/functional/utils.py
tests/functional/data/bbp/config/analysis_config_01.yaml
tests/functional/data/bbp/config/analysis_config_02.yaml
tests/functional/data/bbp/config/analysis_config_03.yaml
tests/functional/data/bbp/config/analysis_config_04.yaml
tests/functional/data/bbp/config/analysis_config_05.yaml
tests/functional/data/bbp/config/analysis_config_06.yaml
tests/functional/data/bbp/config/analysis_config_07.yaml
tests/functional/data/bbp/config/analysis_config_08.yaml
tests/functional/data/bbp/config/analysis_config_09.yaml
tests/functional/data/bbp/config/analysis_config_10.yaml
tests/functional/data/bbp/config/analysis_config_11.yaml
tests/functional/data/bbp/expected/analysis_01/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_01/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_02/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_03/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_04/_filtered/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_04/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_05/soma/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_05/soma/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_05/soma/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_05/soma/repo/report.parquet
tests/functional/data/bbp/expected/analysis_05/soma/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_05/soma/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_06/compartment/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_06/compartment/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_06/compartment/repo/report.parquet
tests/functional/data/bbp/expected/analysis_06/compartment/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_06/compartment/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_07/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_07/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_07/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_07/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_07/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_07/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_08/soma/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_08/soma/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_08/soma/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_08/soma/repo/report.parquet
tests/functional/data/bbp/expected/analysis_08/soma/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_08/soma/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_08/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_0_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_0_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_0_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_0_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_1_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_1_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_1_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_1_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_2_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_2_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_2_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_2_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_0_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_0_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_0_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_0_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_1_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_1_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_1_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_1_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_2_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_2_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_2_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_gid_and_trial_2_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_0_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_0_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_0_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_0_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_1_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_1_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_1_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_1_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_2_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_2_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_2_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_2_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_0_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_0_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_0_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_0_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_1_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_1_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_1_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_1_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_2_0__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_2_0__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_2_1__0.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/features/histograms_2_1__1.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_09/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_10/spikes/repo/windows.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/features/by_gid.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/features/by_gid_and_trial.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/features/by_neuron_class.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/features/histograms.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/repo/neuron_classes.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/repo/neurons.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/repo/report.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/repo/simulations.parquet
tests/functional/data/bbp/expected/analysis_11/spikes/repo/windows.parquet
tests/functional/data/sonata/config/analysis_config_01.yaml
tests/functional/data/sonata/config/analysis_config_02.yaml
tests/functional/data/sonata/config/analysis_config_03.yaml
tests/functional/data/sonata/config/analysis_config_04.yaml
tests/functional/data/sonata/config/analysis_config_05.yaml
tests/functional/data/sonata/config/analysis_config_06.yaml
tests/functional/data/sonata/config/analysis_config_07.yaml
tests/functional/data/sonata/config/analysis_config_08.yaml
tests/functional/data/sonata/config/analysis_config_09.yaml
tests/functional/data/sonata/config/analysis_config_10.yaml
tests/functional/data/sonata/config/analysis_config_11.yaml
tests/functional/data/sonata/config/analysis_config_12.yaml
tests/functional/data/sonata/config/node_sets/node_sets_01.json
tests/functional/data/sonata/expected/analysis_01/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_01/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_02/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_03/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_04/_filtered/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_04/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_05/soma/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_05/soma/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_05/soma/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_05/soma/repo/report.parquet
tests/functional/data/sonata/expected/analysis_05/soma/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_05/soma/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_06/compartment/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_06/compartment/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_06/compartment/repo/report.parquet
tests/functional/data/sonata/expected/analysis_06/compartment/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_06/compartment/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_07/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_07/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_07/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_07/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_07/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_07/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_08/soma/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_08/soma/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_08/soma/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_08/soma/repo/report.parquet
tests/functional/data/sonata/expected/analysis_08/soma/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_08/soma/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_08/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_0_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_0_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_0_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_0_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_1_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_1_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_1_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_1_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_2_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_2_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_2_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_2_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_0_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_0_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_0_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_0_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_1_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_1_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_1_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_1_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_2_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_2_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_2_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_gid_and_trial_2_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_0_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_0_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_0_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_0_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_1_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_1_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_1_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_1_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_2_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_2_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_2_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_2_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_0_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_1_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/by_neuron_class_and_trial_2_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_0_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_0_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_0_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_0_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_1_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_1_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_1_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_1_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_2_0__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_2_0__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_2_1__0.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/features/histograms_2_1__1.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_09/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_10/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_11/spikes/repo/windows.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/features/by_gid.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/features/by_gid_and_trial.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/features/by_neuron_class.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/features/by_neuron_class_and_trial.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/features/histograms.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/repo/neuron_classes.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/repo/neurons.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/repo/report.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/repo/simulations.parquet
tests/functional/data/sonata/expected/analysis_12/spikes/repo/windows.parquet
tests/unit/__init__.py
tests/unit/conftest.py
tests/unit/test_analysis.py
tests/unit/test_cache.py
tests/unit/test_features.py
tests/unit/test_parallel.py
tests/unit/test_repository.py
tests/unit/test_resolver.py
tests/unit/test_utils.py
tests/unit/test_validation.py
tests/unit/utils.py
tests/unit/adapters/__init__.py
tests/unit/adapters/test_circuit.py
tests/unit/adapters/test_node_sets.py
tests/unit/adapters/test_simulation.py
tests/unit/apps/__init__.py
tests/unit/apps/test_convert.py
tests/unit/apps/test_main.py
tests/unit/apps/test_migrate.py
tests/unit/apps/test_run.py
tests/unit/apps/test_validate.py
tests/unit/campaign/__init__.py
tests/unit/campaign/conftest.py
tests/unit/campaign/test_config.py
tests/unit/campaign/test_utils.py
tests/unit/config/__init__.py
tests/unit/config/test_analysis.py
tests/unit/config/test_analysis_model.py
tests/unit/converters/__init__.py
tests/unit/converters/test_convert_spikes.py
tests/unit/data/analysis/analysis_config_01_relative.yaml
tests/unit/data/circuit/README
tests/unit/data/circuit/bbp/CircuitConfig
tests/unit/data/circuit/bbp/circuit.mvd3
tests/unit/data/circuit/bbp/start.target
tests/unit/data/circuit/sonata/circuit_config.json
tests/unit/data/circuit/sonata/node_sets.json
tests/unit/data/circuit/sonata/node_sets_extra.json
tests/unit/data/circuit/sonata/nodes.h5
tests/unit/data/simulation/README
tests/unit/data/simulation/bbp/BlueConfig
tests/unit/data/simulation/bbp/reporting/AllCompartments.h5
tests/unit/data/simulation/bbp/reporting/out.h5
tests/unit/data/simulation/bbp/reporting/soma.h5
tests/unit/data/simulation/sonata/simulation_config.json
tests/unit/data/simulation/sonata/reporting/compartment_named.h5
tests/unit/data/simulation/sonata/reporting/create_reports.py
tests/unit/data/simulation/sonata/reporting/log_spikes.log
tests/unit/data/simulation/sonata/reporting/soma_named.h5
tests/unit/data/simulation/sonata/reporting/soma_report.h5
tests/unit/data/simulation/sonata/reporting/spikes.h5
tests/unit/data/simulation_campaign/config_01_relative_bbp_workflow.json
tests/unit/data/simulation_campaign/config_02_relative_blueetl.yaml
tests/unit/data/simulation_campaign/0/simulation_config.json
tests/unit/data/simulation_campaign/0/reporting/compartment_named.h5
tests/unit/data/simulation_campaign/0/reporting/soma_named.h5
tests/unit/data/simulation_campaign/0/reporting/soma_report.h5
tests/unit/data/simulation_campaign/0/reporting/spikes.h5
tests/unit/extract/__init__.py
tests/unit/extract/conftest.py
tests/unit/extract/test_compartment_report.py
tests/unit/extract/test_neuron_classes.py
tests/unit/extract/test_neurons.py
tests/unit/extract/test_simulations.py
tests/unit/extract/test_soma_report.py
tests/unit/extract/test_spikes.py
tests/unit/extract/test_windows.py
tests/unit/store/__init__.py
tests/unit/store/conftest.py
tests/unit/store/test_feather.py
tests/unit/store/test_hdf.py
tests/unit/store/test_parquet.py