LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
docs/Makefile
docs/img/bioregistry_coverage.svg
docs/img/external_overlap.svg
docs/img/has_attribute.svg
docs/img/license_coverage.svg
docs/img/licenses.svg
docs/img/xrefs.svg
docs/source/cli.rst
docs/source/conf.py
docs/source/index.rst
docs/source/installation.rst
docs/source/logo.png
src/bioregistry/__init__.py
src/bioregistry/__main__.py
src/bioregistry/cli.py
src/bioregistry/compare.py
src/bioregistry/constants.py
src/bioregistry/generate_warnings_file.py
src/bioregistry/lint.py
src/bioregistry/make_curation_list.py
src/bioregistry/resolve.py
src/bioregistry/resolve_identifier.py
src/bioregistry/upload_ndex.py
src/bioregistry/utils.py
src/bioregistry/version.py
src/bioregistry.egg-info/PKG-INFO
src/bioregistry.egg-info/SOURCES.txt
src/bioregistry.egg-info/dependency_links.txt
src/bioregistry.egg-info/entry_points.txt
src/bioregistry.egg-info/not-zip-safe
src/bioregistry.egg-info/requires.txt
src/bioregistry.egg-info/top_level.txt
src/bioregistry/align/__init__.py
src/bioregistry/align/__main__.py
src/bioregistry/align/biolink.py
src/bioregistry/align/bioportal.py
src/bioregistry/align/cli.py
src/bioregistry/align/go.py
src/bioregistry/align/miriam.py
src/bioregistry/align/n2t.py
src/bioregistry/align/ncbi.py
src/bioregistry/align/obofoundry.py
src/bioregistry/align/ols.py
src/bioregistry/align/prefix_commons.py
src/bioregistry/align/utils.py
src/bioregistry/align/wikidata.py
src/bioregistry/app/__init__.py
src/bioregistry/app/test.py
src/bioregistry/app/ui.py
src/bioregistry/app/utils.py
src/bioregistry/app/wsgi.py
src/bioregistry/app/static/logo.svg
src/bioregistry/app/templates/base.html
src/bioregistry/app/templates/download.html
src/bioregistry/app/templates/home.html
src/bioregistry/app/templates/macros.html
src/bioregistry/app/templates/metaresource.html
src/bioregistry/app/templates/metaresources.html
src/bioregistry/app/templates/prose.html
src/bioregistry/app/templates/reference.html
src/bioregistry/app/templates/resolve_disallowed_identifier.html
src/bioregistry/app/templates/resolve_invalid_identifier.html
src/bioregistry/app/templates/resolve_missing_prefix.html
src/bioregistry/app/templates/resolve_missing_providers.html
src/bioregistry/app/templates/resource.html
src/bioregistry/app/templates/resources.html
src/bioregistry/app/templates/summary.html
src/bioregistry/curation/__init__.py
src/bioregistry/curation/add_examples.py
src/bioregistry/curation/add_examples_from_javert.py
src/bioregistry/data/bioregistry.json
src/bioregistry/data/metaregistry.json
src/bioregistry/data/obsolete.json
src/bioregistry/data/processing_biolink.json
src/bioregistry/data/processing_go.json
src/bioregistry/data/wikidata_property_types.json
src/bioregistry/external/__init__.py
src/bioregistry/external/biolink.py
src/bioregistry/external/bioportal.py
src/bioregistry/external/cli.py
src/bioregistry/external/go.py
src/bioregistry/external/miriam.py
src/bioregistry/external/n2t.py
src/bioregistry/external/ncbi.py
src/bioregistry/external/obofoundry.py
src/bioregistry/external/ols.py
src/bioregistry/external/prefix_commons.py
src/bioregistry/external/utils.py
src/bioregistry/external/wikidata.py
tests/__init__.py
tests/test_data.py
tests/test_duplicates.py
tests/test_identifiers_org.py
tests/test_indra.py
tests/test_resolve.py