.travis.yml
AUTHORS
ChangeLog
LICENSE
Makefile
ModelChanges.md
Pipfile
Pipfile.lock
README.md
SPECIFICATION.md
UML.md
_config.yml
context.jsonld
jekyll-theme-dinky.gemspec
meta.jsonld
meta.owl
meta.shex
meta.shexj
meta.ttl
meta.yaml
requirements-dev.txt
requirements.txt
setup.cfg
setup.py
tox.ini
txt
.github/workflows/docs.yaml
.github/workflows/unittests.yaml
biolinkml/__init__.py
biolinkml/meta.py
biolinkml.egg-info/PKG-INFO
biolinkml.egg-info/SOURCES.txt
biolinkml.egg-info/dependency_links.txt
biolinkml.egg-info/entry_points.txt
biolinkml.egg-info/not-zip-safe
biolinkml.egg-info/pbr.json
biolinkml.egg-info/requires.txt
biolinkml.egg-info/top_level.txt
biolinkml/generators/README.md
biolinkml/generators/__init__.py
biolinkml/generators/csvgen.py
biolinkml/generators/dotgen.py
biolinkml/generators/golrgen.py
biolinkml/generators/graphqlgen.py
biolinkml/generators/jsonldcontextgen.py
biolinkml/generators/jsonldgen.py
biolinkml/generators/jsonschemagen.py
biolinkml/generators/lpgen.py
biolinkml/generators/markdowngen.py
biolinkml/generators/namespacegen.py
biolinkml/generators/owlgen.py
biolinkml/generators/protogen.py
biolinkml/generators/pythongen.py
biolinkml/generators/rdfgen.py
biolinkml/generators/shexgen.py
biolinkml/generators/summarygen.py
biolinkml/generators/yumlgen.py
biolinkml/utils/__init__.py
biolinkml/utils/comparefiles.py
biolinkml/utils/context_utils.py
biolinkml/utils/curienamespace.py
biolinkml/utils/dataclass_extensions_375.py
biolinkml/utils/dataclass_extensions_376.py
biolinkml/utils/formatutils.py
biolinkml/utils/generator.py
biolinkml/utils/ifabsent_functions.py
biolinkml/utils/mergeutils.py
biolinkml/utils/metamodelcore.py
biolinkml/utils/namespaces.py
biolinkml/utils/rawloader.py
biolinkml/utils/schemaloader.py
biolinkml/utils/schemasynopsis.py
biolinkml/utils/slot.py
biolinkml/utils/strictness.py
biolinkml/utils/typereferences.py
biolinkml/utils/yamlutils.py
docs/AltDescription.md
docs/ClassDefinition.md
docs/Definition.md
docs/Element.md
docs/Example.md
docs/LocalName.md
docs/Prefix.md
docs/SchemaDefinition.md
docs/SlotDefinition.md
docs/SubsetDefinition.md
docs/TypeDefinition.md
docs/abstract.md
docs/alias.md
docs/aliases.md
docs/alt_description_source.md
docs/alt_description_text.md
docs/alt_descriptions.md
docs/apply_to.md
docs/base.md
docs/class_definition_apply_to.md
docs/class_definition_is_a.md
docs/class_definition_mixins.md
docs/class_uri.md
docs/classes.md
docs/close_mappings.md
docs/comments.md
docs/default_curi_maps.md
docs/default_prefix.md
docs/default_range.md
docs/defining_slots.md
docs/definition_uri.md
docs/deprecated.md
docs/deprecated_element_has_exact_replacement.md
docs/deprecated_element_has_possible_replacement.md
docs/description.md
docs/domain.md
docs/emit_prefixes.md
docs/exact_mappings.md
docs/examples.md
docs/from_schema.md
docs/generation_date.md
docs/id.md
docs/id_prefixes.md
docs/identifier.md
docs/ifabsent.md
docs/imported_from.md
docs/imports.md
docs/in_subset.md
docs/index.md
docs/inherited.md
docs/inlined.md
docs/inverse.md
docs/is_a.md
docs/is_class_field.md
docs/is_usage_slot.md
docs/key.md
docs/license.md
docs/local_name_source.md
docs/local_name_value.md
docs/local_names.md
docs/mappings.md
docs/metamodel_version.md
docs/mixin.md
docs/mixins.md
docs/multivalued.md
docs/name.md
docs/notes.md
docs/owner.md
docs/prefix_prefix.md
docs/prefix_reference.md
docs/prefixes.md
docs/range.md
docs/readonly.md
docs/related_mappings.md
docs/repr.md
docs/required.md
docs/role.md
docs/see_also.md
docs/singular_name.md
docs/slot_definition_apply_to.md
docs/slot_definition_is_a.md
docs/slot_definition_mixins.md
docs/slot_definitions.md
docs/slot_uri.md
docs/slot_usage.md
docs/slots.md
docs/source_file.md
docs/source_file_date.md
docs/source_file_size.md
docs/subclass_of.md
docs/subproperty_of.md
docs/subsets.md
docs/symmetric.md
docs/title.md
docs/todos.md
docs/type_uri.md
docs/typeof.md
docs/types.md
docs/union_of.md
docs/value.md
docs/value_description.md
docs/values_from.md
docs/version.md
docs/types/Boolean.md
docs/types/Date.md
docs/types/Datetime.md
docs/types/Double.md
docs/types/Float.md
docs/types/Integer.md
docs/types/Ncname.md
docs/types/Nodeidentifier.md
docs/types/Objectidentifier.md
docs/types/String.md
docs/types/Time.md
docs/types/Uri.md
docs/types/Uriorcurie.md
examples/organization-data.json
examples/organization.graphql
examples/organization.proto
examples/organization.py
examples/organization.schema.json
examples/organization.shex
examples/organization.yaml
images/Association.png
images/Example.png
images/MultiplicityElement.png
images/Navigable.png
images/NotNavigable.png
images/Properties.png
images/Slot.png
images/StructuralFeature.png
includes/mappings.context.jsonld
includes/mappings.jsonld
includes/mappings.py
includes/mappings.yaml
includes/types.context.jsonld
includes/types.jsonld
includes/types.py
includes/types.yaml
notebooks/DistributedModels.ipynb
notebooks/ShExPrimerModel.ipynb
notebooks/context_issue.ipynb
notebooks/examples.ipynb
semantics/Makefile
semantics/README.md
semantics/biolinkml.pro
semantics/tests/basic.pro
semantics/tests/biolink.pro
semantics/tests/biolink.sexpr
semantics/tests/biolink_test.pro
semantics/tests/defining_slots_test.pro
semantics/tests/disjoint_with_test.pro
semantics/tests/domain_test.pro
semantics/tests/instance_of_test.pro
semantics/tests/run-test.sh
semantics/tests/std_header.pro
semantics/tests/subclass_of_test.pro
tests/__init__.py
tests/source/README.md
tests/source/biolink_import_map.json
tests/source/default_namespace.py
tests/source/default_namespace.yaml
tests/source/inheritedid.py
tests/source/inheritedid.yaml
tests/source/local_import_map.json
tests/source/meta_mappings.json
tests/source/meta_mappings.jsonld
tests/source/meta_mappings.py
tests/source/meta_mappings.ttl
tests/source/meta_mappings.yaml
tests/source/multi_id.py
tests/source/multi_id.yaml
tests/source/ordering.py
tests/source/ordering.yaml
tests/source/slots.yaml
tests/source/testtypes.py
tests/source/testtypes.yaml
tests/source/timepoint.py
tests/source/timepoint.yaml
tests/source/uri_tests.yaml
tests/source/meta_mappings_docs/C1.md
tests/source/meta_mappings_docs/C2.md
tests/source/meta_mappings_docs/C3.md
tests/source/meta_mappings_docs/generated
tests/source/meta_mappings_docs/index.md
tests/source/meta_mappings_docs/s1.md
tests/source/meta_mappings_docs/s2.md
tests/source/meta_mappings_docs/types/IdentifierType.md
tests/source/meta_mappings_docs/types/String.md
tests/target/ordering.py
tests/test_base/__init__.py
tests/test_base/new_model.sh
tests/test_base/test_context.py
tests/test_base/test_json.py
tests/test_base/test_mappings_generators.py
tests/test_base/test_metamodel.py
tests/test_base/test_model_uris.py
tests/test_base/test_python.py
tests/test_biolink_model/__init__.py
tests/test_biolink_model/new_model.sh
tests/test_biolink_model/test_biolink_model.py
tests/test_biolink_model/data/correct.ttl
tests/test_biolink_model/data/incorrect.errs
tests/test_biolink_model/data/incorrect.ttl
tests/test_biolink_model/data/probe.ttl
tests/test_biolink_model/source/biolink-model.context.jsonld
tests/test_biolink_model/source/biolink-model.context.native.jsonld
tests/test_biolink_model/source/biolink-model.graphql
tests/test_biolink_model/source/biolink-model.json.schema
tests/test_biolink_model/source/biolink-model.jsonld
tests/test_biolink_model/source/biolink-model.native.owl
tests/test_biolink_model/source/biolink-model.native.shex
tests/test_biolink_model/source/biolink-model.native.shexj
tests/test_biolink_model/source/biolink-model.owl
tests/test_biolink_model/source/biolink-model.proto
tests/test_biolink_model/source/biolink-model.shex
tests/test_biolink_model/source/biolink-model.shexj
tests/test_biolink_model/source/biolink-model.tsv
tests/test_biolink_model/source/biolink-model.ttl
tests/test_biolink_model/source/model.py
tests/test_biolink_model/source/namespaces.py
tests/test_biolink_model/source/golr/RNA_product-config.yaml
tests/test_biolink_model/source/golr/RNA_product_isoform-config.yaml
tests/test_biolink_model/source/golr/abstract_entity-config.yaml
tests/test_biolink_model/source/golr/activity_and_behavior-config.yaml
tests/test_biolink_model/source/golr/anatomical_entity-config.yaml
tests/test_biolink_model/source/golr/anatomical_entity_to_anatomical_entity_association-config.yaml
tests/test_biolink_model/source/golr/anatomical_entity_to_anatomical_entity_ontogenic_association-config.yaml
tests/test_biolink_model/source/golr/anatomical_entity_to_anatomical_entity_part_of_association-config.yaml
tests/test_biolink_model/source/golr/association-config.yaml
tests/test_biolink_model/source/golr/attribute-config.yaml
tests/test_biolink_model/source/golr/biological_process-config.yaml
tests/test_biolink_model/source/golr/biological_process_or_activity-config.yaml
tests/test_biolink_model/source/golr/biological_sex-config.yaml
tests/test_biolink_model/source/golr/carbohydrate-config.yaml
tests/test_biolink_model/source/golr/case-config.yaml
tests/test_biolink_model/source/golr/case_to_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/cell-config.yaml
tests/test_biolink_model/source/golr/cell_line-config.yaml
tests/test_biolink_model/source/golr/cell_line_to_disease_or_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/cellular_component-config.yaml
tests/test_biolink_model/source/golr/chemical_exposure-config.yaml
tests/test_biolink_model/source/golr/chemical_substance-config.yaml
tests/test_biolink_model/source/golr/chemical_to_chemical_association-config.yaml
tests/test_biolink_model/source/golr/chemical_to_chemical_derivation_association-config.yaml
tests/test_biolink_model/source/golr/chemical_to_disease_or_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/chemical_to_gene_association-config.yaml
tests/test_biolink_model/source/golr/chemical_to_pathway_association-config.yaml
tests/test_biolink_model/source/golr/clinical_entity-config.yaml
tests/test_biolink_model/source/golr/clinical_intervention-config.yaml
tests/test_biolink_model/source/golr/clinical_modifier-config.yaml
tests/test_biolink_model/source/golr/clinical_trial-config.yaml
tests/test_biolink_model/source/golr/coding_sequence-config.yaml
tests/test_biolink_model/source/golr/confidence_level-config.yaml
tests/test_biolink_model/source/golr/data_file-config.yaml
tests/test_biolink_model/source/golr/data_set-config.yaml
tests/test_biolink_model/source/golr/data_set_summary-config.yaml
tests/test_biolink_model/source/golr/data_set_version-config.yaml
tests/test_biolink_model/source/golr/device-config.yaml
tests/test_biolink_model/source/golr/disease-config.yaml
tests/test_biolink_model/source/golr/disease_or_phenotypic_feature-config.yaml
tests/test_biolink_model/source/golr/disease_or_phenotypic_feature_association_to_location_association-config.yaml
tests/test_biolink_model/source/golr/disease_to_exposure_association-config.yaml
tests/test_biolink_model/source/golr/disease_to_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/distribution_level-config.yaml
tests/test_biolink_model/source/golr/drug-config.yaml
tests/test_biolink_model/source/golr/drug_exposure-config.yaml
tests/test_biolink_model/source/golr/environmental_feature-config.yaml
tests/test_biolink_model/source/golr/environmental_process-config.yaml
tests/test_biolink_model/source/golr/evidence_type-config.yaml
tests/test_biolink_model/source/golr/exon-config.yaml
tests/test_biolink_model/source/golr/exon_to_transcript_relationship-config.yaml
tests/test_biolink_model/source/golr/exposure_event-config.yaml
tests/test_biolink_model/source/golr/exposure_event_to_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/frequency_qualifier_mixin-config.yaml
tests/test_biolink_model/source/golr/frequency_quantifier-config.yaml
tests/test_biolink_model/source/golr/frequency_value-config.yaml
tests/test_biolink_model/source/golr/functional_association-config.yaml
tests/test_biolink_model/source/golr/gene-config.yaml
tests/test_biolink_model/source/golr/gene_as_a_model_of_disease_association-config.yaml
tests/test_biolink_model/source/golr/gene_family-config.yaml
tests/test_biolink_model/source/golr/gene_has_variant_that_contributes_to_disease_association-config.yaml
tests/test_biolink_model/source/golr/gene_ontology_class-config.yaml
tests/test_biolink_model/source/golr/gene_or_gene_product-config.yaml
tests/test_biolink_model/source/golr/gene_product-config.yaml
tests/test_biolink_model/source/golr/gene_regulatory_relationship-config.yaml
tests/test_biolink_model/source/golr/gene_to_disease_association-config.yaml
tests/test_biolink_model/source/golr/gene_to_expression_site_association-config.yaml
tests/test_biolink_model/source/golr/gene_to_gene_homology_association-config.yaml
tests/test_biolink_model/source/golr/gene_to_gene_product_relationship-config.yaml
tests/test_biolink_model/source/golr/gene_to_go_term_association-config.yaml
tests/test_biolink_model/source/golr/gene_to_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/generated
tests/test_biolink_model/source/golr/genome-config.yaml
tests/test_biolink_model/source/golr/genomic_entity-config.yaml
tests/test_biolink_model/source/golr/genomic_sequence_localization-config.yaml
tests/test_biolink_model/source/golr/genotype-config.yaml
tests/test_biolink_model/source/golr/genotype_to_gene_association-config.yaml
tests/test_biolink_model/source/golr/genotype_to_genotype_part_association-config.yaml
tests/test_biolink_model/source/golr/genotype_to_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/genotype_to_variant_association-config.yaml
tests/test_biolink_model/source/golr/genotypic_sex-config.yaml
tests/test_biolink_model/source/golr/geographic_location-config.yaml
tests/test_biolink_model/source/golr/geographic_location_at_time-config.yaml
tests/test_biolink_model/source/golr/gross_anatomical_structure-config.yaml
tests/test_biolink_model/source/golr/haplotype-config.yaml
tests/test_biolink_model/source/golr/individual_organism-config.yaml
tests/test_biolink_model/source/golr/life_stage-config.yaml
tests/test_biolink_model/source/golr/macromolecular_complex-config.yaml
tests/test_biolink_model/source/golr/macromolecular_machine-config.yaml
tests/test_biolink_model/source/golr/macromolecular_machine_to_biological_process_association-config.yaml
tests/test_biolink_model/source/golr/macromolecular_machine_to_cellular_component_association-config.yaml
tests/test_biolink_model/source/golr/macromolecular_machine_to_molecular_activity_association-config.yaml
tests/test_biolink_model/source/golr/material_sample-config.yaml
tests/test_biolink_model/source/golr/material_sample_derivation_association-config.yaml
tests/test_biolink_model/source/golr/material_sample_to_disease_or_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/metabolite-config.yaml
tests/test_biolink_model/source/golr/microRNA-config.yaml
tests/test_biolink_model/source/golr/molecular_activity-config.yaml
tests/test_biolink_model/source/golr/molecular_entity-config.yaml
tests/test_biolink_model/source/golr/named_thing-config.yaml
tests/test_biolink_model/source/golr/noncoding_RNA_product-config.yaml
tests/test_biolink_model/source/golr/occurrent-config.yaml
tests/test_biolink_model/source/golr/onset-config.yaml
tests/test_biolink_model/source/golr/ontology_class-config.yaml
tests/test_biolink_model/source/golr/organism_taxon-config.yaml
tests/test_biolink_model/source/golr/pairwise_gene_to_gene_interaction-config.yaml
tests/test_biolink_model/source/golr/pathognomonicity_quantifier-config.yaml
tests/test_biolink_model/source/golr/pathway-config.yaml
tests/test_biolink_model/source/golr/phenomenon-config.yaml
tests/test_biolink_model/source/golr/phenotypic_feature-config.yaml
tests/test_biolink_model/source/golr/phenotypic_sex-config.yaml
tests/test_biolink_model/source/golr/physical_entity-config.yaml
tests/test_biolink_model/source/golr/physiological_process-config.yaml
tests/test_biolink_model/source/golr/planetary_entity-config.yaml
tests/test_biolink_model/source/golr/population_of_individual_organisms-config.yaml
tests/test_biolink_model/source/golr/population_to_population_association-config.yaml
tests/test_biolink_model/source/golr/procedure-config.yaml
tests/test_biolink_model/source/golr/protein-config.yaml
tests/test_biolink_model/source/golr/protein_isoform-config.yaml
tests/test_biolink_model/source/golr/provider-config.yaml
tests/test_biolink_model/source/golr/publication-config.yaml
tests/test_biolink_model/source/golr/quantity_value-config.yaml
tests/test_biolink_model/source/golr/relationship_type-config.yaml
tests/test_biolink_model/source/golr/sensitivity_quantifier-config.yaml
tests/test_biolink_model/source/golr/sequence_feature_relationship-config.yaml
tests/test_biolink_model/source/golr/sequence_variant-config.yaml
tests/test_biolink_model/source/golr/severity_value-config.yaml
tests/test_biolink_model/source/golr/source_file-config.yaml
tests/test_biolink_model/source/golr/specificity_quantifier-config.yaml
tests/test_biolink_model/source/golr/transcript-config.yaml
tests/test_biolink_model/source/golr/transcript_to_gene_relationship-config.yaml
tests/test_biolink_model/source/golr/treatment-config.yaml
tests/test_biolink_model/source/golr/variant_to_disease_association-config.yaml
tests/test_biolink_model/source/golr/variant_to_phenotypic_feature_association-config.yaml
tests/test_biolink_model/source/golr/variant_to_population_association-config.yaml
tests/test_biolink_model/source/golr/zygosity-config.yaml
tests/test_biolink_model/source/markdown/AbstractEntity.md
tests/test_biolink_model/source/markdown/ActivityAndBehavior.md
tests/test_biolink_model/source/markdown/AdministrativeEntity.md
tests/test_biolink_model/source/markdown/AnatomicalEntity.md
tests/test_biolink_model/source/markdown/AnatomicalEntityToAnatomicalEntityAssociation.md
tests/test_biolink_model/source/markdown/AnatomicalEntityToAnatomicalEntityOntogenicAssociation.md
tests/test_biolink_model/source/markdown/AnatomicalEntityToAnatomicalEntityPartOfAssociation.md
tests/test_biolink_model/source/markdown/Association.md
tests/test_biolink_model/source/markdown/Attribute.md
tests/test_biolink_model/source/markdown/BiologicalEntity.md
tests/test_biolink_model/source/markdown/BiologicalProcess.md
tests/test_biolink_model/source/markdown/BiologicalProcessOrActivity.md
tests/test_biolink_model/source/markdown/BiologicalSex.md
tests/test_biolink_model/source/markdown/Carbohydrate.md
tests/test_biolink_model/source/markdown/Case.md
tests/test_biolink_model/source/markdown/CaseToPhenotypicFeatureAssociation.md
tests/test_biolink_model/source/markdown/CaseToThingAssociation.md
tests/test_biolink_model/source/markdown/Cell.md
tests/test_biolink_model/source/markdown/CellLine.md
tests/test_biolink_model/source/markdown/CellLineToDiseaseOrPhenotypicFeatureAssociation.md
tests/test_biolink_model/source/markdown/CellLineToThingAssociation.md
tests/test_biolink_model/source/markdown/CellularComponent.md
tests/test_biolink_model/source/markdown/ChemicalExposure.md
tests/test_biolink_model/source/markdown/ChemicalSubstance.md
tests/test_biolink_model/source/markdown/ChemicalToChemicalAssociation.md
tests/test_biolink_model/source/markdown/ChemicalToChemicalDerivationAssociation.md
tests/test_biolink_model/source/markdown/ChemicalToDiseaseOrPhenotypicFeatureAssociation.md
tests/test_biolink_model/source/markdown/ChemicalToGeneAssociation.md
tests/test_biolink_model/source/markdown/ChemicalToPathwayAssociation.md
tests/test_biolink_model/source/markdown/ChemicalToThingAssociation.md
tests/test_biolink_model/source/markdown/ClinicalEntity.md
tests/test_biolink_model/source/markdown/ClinicalIntervention.md
tests/test_biolink_model/source/markdown/ClinicalModifier.md
tests/test_biolink_model/source/markdown/ClinicalTrial.md
tests/test_biolink_model/source/markdown/CodingSequence.md
tests/test_biolink_model/source/markdown/ConfidenceLevel.md
tests/test_biolink_model/source/markdown/DataFile.md
tests/test_biolink_model/source/markdown/DataSet.md
tests/test_biolink_model/source/markdown/DataSetSummary.md
tests/test_biolink_model/source/markdown/DataSetVersion.md
tests/test_biolink_model/source/markdown/Device.md
tests/test_biolink_model/source/markdown/Disease.md
tests/test_biolink_model/source/markdown/DiseaseOrPhenotypicFeature.md
tests/test_biolink_model/source/markdown/DiseaseOrPhenotypicFeatureAssociationToLocationAssociation.md
tests/test_biolink_model/source/markdown/DiseaseOrPhenotypicFeatureAssociationToThingAssociation.md
tests/test_biolink_model/source/markdown/DiseaseToExposureAssociation.md
tests/test_biolink_model/source/markdown/DiseaseToPhenotypicFeatureAssociation.md
tests/test_biolink_model/source/markdown/DiseaseToThingAssociation.md
tests/test_biolink_model/source/markdown/DistributionLevel.md
tests/test_biolink_model/source/markdown/Drug.md
tests/test_biolink_model/source/markdown/DrugExposure.md
tests/test_biolink_model/source/markdown/EntityToDiseaseAssociation.md
tests/test_biolink_model/source/markdown/EntityToFeatureOrDiseaseQualifiers.md
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tests/test_biolink_model/source/markdown/GeneGrouping.md
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tests/test_biolink_model/source/markdown/GeneProductIsoform.md
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tests/test_biolink_model/source/markdown/GeneToExpressionSiteAssociation.md
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tests/test_biolink_model/source/markdown/GeneToGeneHomologyAssociation.md
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tests/test_biolink_model/source/markdown/GeneToGoTermAssociation.md
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tests/test_biolink_model/source/markdown/GeneToThingAssociation.md
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tests/test_biolink_model/source/markdown/GenotypeToGeneAssociation.md
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tests/test_biolink_model/source/markdown/GenotypeToThingAssociation.md
tests/test_biolink_model/source/markdown/GenotypeToVariantAssociation.md
tests/test_biolink_model/source/markdown/GenotypicSex.md
tests/test_biolink_model/source/markdown/GeographicLocation.md
tests/test_biolink_model/source/markdown/GeographicLocationAtTime.md
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tests/test_biolink_model/source/markdown/Haplotype.md
tests/test_biolink_model/source/markdown/IndividualOrganism.md
tests/test_biolink_model/source/markdown/InformationContentEntity.md
tests/test_biolink_model/source/markdown/LifeStage.md
tests/test_biolink_model/source/markdown/MacromolecularComplex.md
tests/test_biolink_model/source/markdown/MacromolecularMachine.md
tests/test_biolink_model/source/markdown/MacromolecularMachineToBiologicalProcessAssociation.md
tests/test_biolink_model/source/markdown/MacromolecularMachineToCellularComponentAssociation.md
tests/test_biolink_model/source/markdown/MacromolecularMachineToMolecularActivityAssociation.md
tests/test_biolink_model/source/markdown/MaterialSample.md
tests/test_biolink_model/source/markdown/MaterialSampleDerivationAssociation.md
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tests/test_biolink_model/source/markdown/MaterialSampleToThingAssociation.md
tests/test_biolink_model/source/markdown/Metabolite.md
tests/test_biolink_model/source/markdown/MicroRNA.md
tests/test_biolink_model/source/markdown/ModelToDiseaseMixin.md
tests/test_biolink_model/source/markdown/MolecularActivity.md
tests/test_biolink_model/source/markdown/MolecularEntity.md
tests/test_biolink_model/source/markdown/NamedThing.md
tests/test_biolink_model/source/markdown/NoncodingRNAProduct.md
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tests/test_biolink_model/source/markdown/PairwiseGeneToGeneInteraction.md
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tests/test_biolink_model/source/markdown/Phenomenon.md
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tests/test_biolink_model/source/markdown/PhenotypicSex.md
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tests/test_biolink_model/source/markdown/PlanetaryEntity.md
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tests/test_biolink_model/source/markdown/Protein.md
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tests/test_biolink_model/source/markdown/Publication.md
tests/test_biolink_model/source/markdown/QuantityValue.md
tests/test_biolink_model/source/markdown/RNAProduct.md
tests/test_biolink_model/source/markdown/RNAProductIsoform.md
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tests/test_biolink_model/source/markdown/RelationshipType.md
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tests/test_biolink_model/source/markdown/SequenceVariantModulatesTreatmentAssociation.md
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tests/test_biolink_model/source/markdown/SourceFile.md
tests/test_biolink_model/source/markdown/SpecificityQuantifier.md
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tests/test_biolink_model/source/markdown/ThingWithTaxon.md
tests/test_biolink_model/source/markdown/Transcript.md
tests/test_biolink_model/source/markdown/TranscriptToGeneRelationship.md
tests/test_biolink_model/source/markdown/Treatment.md
tests/test_biolink_model/source/markdown/VariantToDiseaseAssociation.md
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tests/test_biolink_model/source/markdown/VariantToPopulationAssociation.md
tests/test_biolink_model/source/markdown/VariantToThingAssociation.md
tests/test_biolink_model/source/markdown/Zygosity.md
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