setup.py
bin/epic
bin/epic-effective
bioepic.egg-info/PKG-INFO
bioepic.egg-info/SOURCES.txt
bioepic.egg-info/dependency_links.txt
bioepic.egg-info/requires.txt
bioepic.egg-info/top_level.txt
epic/__init__.py
epic/version.py
epic/config/__init__.py
epic/config/cache_settings.py
epic/config/constants.py
epic/config/genomes.py
epic/config/logging_settings.py
epic/run/__init__.py
epic/run/run_epic.py
epic/scripts/__init__.py
epic/scripts/effective_genome_size.py
epic/statistics/__init__.py
epic/statistics/add_to_island_expectations.py
epic/statistics/compute_background_probabilites.py
epic/statistics/compute_poisson.py
epic/statistics/compute_score_threshold.py
epic/statistics/compute_values_needed_for_recurrence.py
epic/statistics/compute_window_score.py
epic/statistics/count_to_pvalue.py
epic/statistics/fdr.py
epic/statistics/generate_cumulative_distribution.py
epic/utils/__init__.py
epic/utils/helper_functions.py
epic/utils/separate_input_and_chip_infiles.py
epic/windows/__init__.py
epic/windows/cluster/__init__.py
epic/windows/cluster/find_islands.py
epic/windows/count/__init__.py
epic/windows/count/count_reads_in_windows.py
epic/windows/count/merge_chromosome_dfs.py
epic/windows/count/remove_out_of_bounds_bins.py
tests/__init__.py
tests/windows/__init__.py
tests/windows/test_count_reads_in_windows.py
tests/windows/test_merge_chromosome_dfs.py