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-   :octicons-book-24:{ .lg .middle } __API Reference__

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    The *BioCypher API reference* provides a comprehensive overview of the API, detailing its methods, available parameters, and their functionality. This guide is designed for users who have a foundational understanding of key BioCypher concepts and developers.

    [:octicons-arrow-right-24: To the reference guide](source/index.md)

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-   :octicons-tools-24::simple-yaml:{ .lg .middle } __BioCypher Configuration__

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    The *BioCypher configuration reference* offers an in-depth guide to the settings, fields, and parameters that control BioCypher’s behavior and execution. It serves as a resource for customizing BioCypher to fit specific use cases and workflows.

    [:octicons-arrow-right-24: To the configuration reference](biocypher-config.md)
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-   :octicons-tools-24::simple-yaml:{ .lg .middle } __Output Configuration__

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    The *output configuration reference* describes the options available for BioCypher's output formats.

    [:octicons-arrow-right-24: To the output configuration reference](outputs/index.md)
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-   :octicons-tools-24::simple-yaml:{ .lg .middle } __Schema Configuration__

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    The *schema configuration reference* explains the parameters used in the YAML file that defines the structure of the data model. It provides guidance on mapping entities and relationships to ensure seamless data integration.

    [:octicons-arrow-right-24: To the schema configuration reference](schema-config.md)

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