LICENSE
README.md
pyproject.toml
biobuntu.egg-info/PKG-INFO
biobuntu.egg-info/SOURCES.txt
biobuntu.egg-info/dependency_links.txt
biobuntu.egg-info/entry_points.txt
biobuntu.egg-info/requires.txt
biobuntu.egg-info/top_level.txt
cli/__init__.py
cli/cli.py
core/__init__.py
core/config.py
core/engine.py
core/file_manager.py
core/logger.py
core/project_manager.py
core/runner.py
core/utils.py
gui/__init__.py
gui/main.py
tests/test_cli.py
tests/test_engine.py
tests/test_workflows.py
tools/bwa.py
tools/fastqc.py
tools/gatk.py
tools/hisat2.py
tools/samtools.py
web/__init__.py
web/api.py