numpy>=2
zarr>=3.1
tabulate
tqdm
humanfriendly
coloredlogs
click
pandas

[all]
tskit>=1
cyvcf2

[dev]
click>=8.2.0
hypothesis-vcf
msprime
pysam
pytest
pytest-coverage
pytest-xdist
tqdm
tskit>=1
bed_reader
cyvcf2
xarray<2025.03.1
dask[array]<=2024.8.0,>=2022.01.0

[tskit]
tskit>=1

[vcf]
cyvcf2
