from ._antibody_fv_rmsd import antibody_fv_rmsd
from ._contact_matrix import contact_matrix
from ._dockq import dockq, dockq_contact_score, dockq_irmsd_score, dockq_lrmsd_score
from ._rename_chains import rename_chains
from ._rename_symmetric_atoms import (
    rename_symmetric_atoms,
    swap_symmetric_atom_thin_atoms,
)
from ._renumber import renumber, renumber_from_gapped
from ._residue_array import ResidueArray
from ._rigid import Rigid
from ._superimpose import rmsd, superimpose
