LICENSE
MANIFEST.in
README.md
pyproject.toml
src/baktfold/__init__.py
src/baktfold.egg-info/PKG-INFO
src/baktfold.egg-info/SOURCES.txt
src/baktfold.egg-info/dependency_links.txt
src/baktfold.egg-info/entry_points.txt
src/baktfold.egg-info/requires.txt
src/baktfold.egg-info/top_level.txt
src/baktfold.egg-info/zip-safe
src/baktfold/bakta/annotation.py
src/baktfold/bakta/config.py
src/baktfold/bakta/constants.py
src/baktfold/bakta/pstc.py
src/baktfold/bakta/so.py
src/baktfold/cnn/cnn_chkpnt/model.pt
src/baktfold/databases/db.py
src/baktfold/features/create_foldseek_db.py
src/baktfold/features/predict_3Di.py
src/baktfold/features/run_foldseek.py
src/baktfold/io/__init__.py
src/baktfold/io/fasta.py
src/baktfold/io/fasta_in.py
src/baktfold/io/gff.py
src/baktfold/io/handle_genbank.py
src/baktfold/io/insdc.py
src/baktfold/io/io.py
src/baktfold/io/json.py
src/baktfold/io/json_in.py
src/baktfold/io/tsv.py
src/baktfold/results/tophit.py
src/baktfold/subcommands/compare.py
src/baktfold/subcommands/predict.py
src/baktfold/utils/CITATION
src/baktfold/utils/VERSION
src/baktfold/utils/constants.py
src/baktfold/utils/external_tools.py
src/baktfold/utils/util.py
src/baktfold/utils/validation.py
tests/test_integration.py