.bandit
CHANGELOG.md
CODE_OF_CONDUCT.md
CONTRIBUTING.md
LICENSE
LICENSE_CHANGE_ANNOUNCEMENT.md
MANIFEST.in
README.md
SECURITY.md
pyproject.toml
requirements.txt
agents/code_inspection/patterns/inspection/recurring_B112.json
agents/code_inspection/patterns/inspection/recurring_F541.json
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attune_healthcare/monitors/__init__.py
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attune_healthcare/monitors/monitoring/protocol_loader.py
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attune_healthcare/monitors/monitoring/trajectory_analyzer.py
attune_llm/README.md
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attune_llm/claude_memory.py
attune_llm/code_health.py
attune_llm/contextual_patterns.py
attune_llm/core.py
attune_llm/git_pattern_extractor.py
attune_llm/levels.py
attune_llm/pattern_confidence.py
attune_llm/pattern_resolver.py
attune_llm/pattern_summary.py
attune_llm/providers.py
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attune_llm/state.py
attune_llm/agent_factory/__init__.py
attune_llm/agent_factory/base.py
attune_llm/agent_factory/decorators.py
attune_llm/agent_factory/factory.py
attune_llm/agent_factory/framework.py
attune_llm/agent_factory/memory_integration.py
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attune_llm/learning/storage.py
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attune_llm/routing/model_router.py
attune_llm/security/IMPLEMENTATION_SUMMARY.md
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attune_llm/security/PHASE2_SECRETS_DETECTOR_COMPLETE.md
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attune_software/SOFTWARE_PLUGIN_README.md
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examples/agent_tracking_demo.py
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examples/approval_gates_demo.py
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src/attune/workflows/pr_review.py
src/attune/workflows/progress.py
src/attune/workflows/progress_server.py
src/attune/workflows/refactor_plan.py
src/attune/workflows/release_prep.py
src/attune/workflows/release_prep_crew.py
src/attune/workflows/research_synthesis.py
src/attune/workflows/routing.py
src/attune/workflows/secure_release.py
src/attune/workflows/security_adapters.py
src/attune/workflows/security_audit.py
src/attune/workflows/security_audit_phase3.py
src/attune/workflows/seo_optimization.py
src/attune/workflows/step_config.py
src/attune/workflows/telemetry_mixin.py
src/attune/workflows/test5.py
src/attune/workflows/test5_README.md
src/attune/workflows/test_coverage_boost_crew.py
src/attune/workflows/test_gen.py
src/attune/workflows/test_gen_behavioral.py
src/attune/workflows/test_gen_parallel.py
src/attune/workflows/test_lifecycle.py
src/attune/workflows/test_maintenance.py
src/attune/workflows/test_maintenance_cli.py
src/attune/workflows/test_maintenance_crew.py
src/attune/workflows/test_runner.py
src/attune/workflows/tier_tracking.py
src/attune/workflows/xml_enhanced_crew.py
src/attune/workflows/document_gen/__init__.py
src/attune/workflows/document_gen/config.py
src/attune/workflows/document_gen/report_formatter.py
src/attune/workflows/document_gen/workflow.py
src/attune/workflows/keyboard_shortcuts/__init__.py
src/attune/workflows/keyboard_shortcuts/generators.py
src/attune/workflows/keyboard_shortcuts/parsers.py
src/attune/workflows/keyboard_shortcuts/prompts.py
src/attune/workflows/keyboard_shortcuts/schema.py
src/attune/workflows/keyboard_shortcuts/workflow.py
src/attune/workflows/progressive/README.md
src/attune/workflows/progressive/__init__.py
src/attune/workflows/progressive/cli.py
src/attune/workflows/progressive/core.py
src/attune/workflows/progressive/orchestrator.py
src/attune/workflows/progressive/reports.py
src/attune/workflows/progressive/telemetry.py
src/attune/workflows/progressive/test_gen.py
src/attune/workflows/progressive/workflow.py
src/attune/workflows/test_gen/__init__.py
src/attune/workflows/test_gen/ast_analyzer.py
src/attune/workflows/test_gen/config.py
src/attune/workflows/test_gen/data_models.py
src/attune/workflows/test_gen/report_formatter.py
src/attune/workflows/test_gen/test_templates.py
src/attune/workflows/test_gen/workflow.py
tests/test_agent_factory.py
tests/test_agent_factory_memory.py
tests/test_agent_factory_resilience.py
tests/test_audit_logger.py
tests/test_audit_logger_extended.py
tests/test_base.py
tests/test_baseline.py
tests/test_book_production_agents.py
tests/test_bug_predict_workflow.py
tests/test_claude_memory.py
tests/test_claude_memory_extended.py
tests/test_clinical_protocol_monitor.py
tests/test_code_health.py
tests/test_code_review.py
tests/test_code_review_crew_integration.py
tests/test_code_review_pipeline.py
tests/test_code_review_pipeline_workflow.py
tests/test_code_review_workflow.py
tests/test_config.py
tests/test_control_panel.py
tests/test_control_panel_security.py
tests/test_coordination.py
tests/test_core.py
tests/test_core_reliability.py
tests/test_cost_tracker.py
tests/test_dependency_check.py
tests/test_dependency_check_workflow.py
tests/test_discovery.py
tests/test_document_gen.py
tests/test_document_gen_workflow.py
tests/test_emergence.py
tests/test_empathy_llm_core.py
tests/test_empathy_llm_security.py
tests/test_empathy_os.py
tests/test_exceptions.py
tests/test_executor_integration.py
tests/test_fallback.py
tests/test_fallback_suite.py
tests/test_feedback_loops.py
tests/test_finding_extraction.py
tests/test_graph.py
tests/test_health_check.py
tests/test_healthcare_plugin.py
tests/test_intelligence_integration.py
tests/test_levels.py
tests/test_leverage_points.py
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tests/test_llm_toolkit_agents.py
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tests/test_llm_toolkit_empathy_core.py
tests/test_llm_toolkit_langgraph_adapter.py
tests/test_llm_toolkit_levels.py
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tests/test_llm_toolkit_patterns.py
tests/test_llm_toolkit_providers.py
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tests/test_llm_toolkit_session_status.py
tests/test_llm_toolkit_wizard_adapter.py
tests/test_logging_config.py
tests/test_long_term.py
tests/test_memory_graph.py
tests/test_model_registry.py
tests/test_model_router.py
tests/test_monitoring.py
tests/test_pattern_cache.py
tests/test_pattern_library.py
tests/test_perf_audit_workflow.py
tests/test_persistence.py
tests/test_pii_scrubber.py
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tests/test_pr_review_workflow.py
tests/test_production_smoke.py
tests/test_progress.py
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tests/test_smart_router.py
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tests/test_summary_index.py
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tests/test_tech_debt_wizard.py
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tests/test_workflow_commands.py
tests/test_workflow_wizard_integration.py
tests/test_xml_prompts.py
tests/test_xml_spec_generation.py
workflow_scaffolding/__init__.py
workflow_scaffolding/__main__.py
workflow_scaffolding/cli.py
workflow_scaffolding/generator.py