LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
src/asymmetree/__init__.py
src/asymmetree.egg-info/PKG-INFO
src/asymmetree.egg-info/SOURCES.txt
src/asymmetree.egg-info/dependency_links.txt
src/asymmetree.egg-info/requires.txt
src/asymmetree.egg-info/top_level.txt
src/asymmetree/analysis/BestMatches.py
src/asymmetree/analysis/HGT.py
src/asymmetree/analysis/__init__.py
src/asymmetree/file_io/SeqFileIO.py
src/asymmetree/file_io/SubstModelIO.py
src/asymmetree/file_io/__init__.py
src/asymmetree/genome/GenomeSimulation.py
src/asymmetree/genome/__init__.py
src/asymmetree/seqevolve/Alignment.py
src/asymmetree/seqevolve/EmpiricalModels.py
src/asymmetree/seqevolve/Evolver.py
src/asymmetree/seqevolve/EvolvingSequence.py
src/asymmetree/seqevolve/HetModel.py
src/asymmetree/seqevolve/IndelModel.py
src/asymmetree/seqevolve/SubstModel.py
src/asymmetree/seqevolve/__init__.py
src/asymmetree/tools/DistanceCalculation.py
src/asymmetree/tools/PhyloTreeTools.py
src/asymmetree/tools/Sampling.py
src/asymmetree/tools/__init__.py
src/asymmetree/treeevolve/DistanceNoise.py
src/asymmetree/treeevolve/GeneTree.py
src/asymmetree/treeevolve/RateHeterogeneity.py
src/asymmetree/treeevolve/SpeciesTree.py
src/asymmetree/treeevolve/__init__.py
src/asymmetree/visualize/TreeVis.py
src/asymmetree/visualize/__init__.py