# -*- coding: utf-8 -*-

# best match computation
from asymmetree.best_matches.TrueBMG import (orthology_from_tree,
                                             bmg_from_tree)

from asymmetree.best_matches.LeastResolvedTree import (lrt_from_observable_tree,
                                                       lrt_from_colored_graph,
                                                       binary_refinable_tree)

from asymmetree.best_matches.Augmentation import augment_and_label


# best match estimation
from asymmetree.best_matches.ExtBestHits import (ebh,
                                                 ebh_qinfer,
                                                 ebh_from_scenario)

from asymmetree.best_matches.TreeReconstruction import (bmg_by_tree_reconstruction,
                                                        neighbor_joining,
                                                        midpoint_rooting,
                                                        nj_from_numpy_matrix)

from asymmetree.best_matches.Quartets import (Quartets,
                                              quartet_qinfer,
                                              quartet_from_scenario)