from .types import complex_type, real_type, utest_tolerance  # isort:skip
from .coor_trans import (  # isort:skip
    common_line_from_rots,
    crop_pad_2d,
    crop_pad_3d,
    get_aligned_rotations,
    get_rots_mse,
    grid_1d,
    grid_2d,
    grid_3d,
    register_rotations,
    rots_to_clmatrix,
    uniform_random_angles,
)

from .misc import (  # isort:skip
    all_pairs,
    all_triplets,
    abs2,
    bump_3d,
    circ,
    cyclic_rotations,
    gaussian_1d,
    gaussian_2d,
    gaussian_3d,
    importlib_path,
    inverse_r,
    J_conjugate,
    powerset,
    sha256sum,
    support_mask,
    fuzzy_mask,
)

from .logging import LogFilterByCount, get_full_version, tqdm, trange
from .matrix import (
    acorr,
    ainner,
    anorm,
    best_rank1_approximation,
    eigs,
    fix_signs,
    im_to_vec,
    make_psd,
    make_symmat,
    mat_to_vec,
    mdim_mat_fun_conj,
    roll_dim,
    symmat_to_vec,
    symmat_to_vec_iso,
    unroll_dim,
    vec_to_im,
    vec_to_mat,
    vec_to_symmat,
    vec_to_symmat_iso,
    vec_to_vol,
    vecmat_to_volmat,
    vol_to_vec,
    volmat_to_vecmat,
)
from .multiprocessing import (
    mem_based_cpu_suggestion,
    num_procs_suggestion,
    physical_core_cpu_suggestion,
    virtual_core_cpu_suggestion,
)
from .random import Random, choice, rand, randi, randn, random
from .relion_interop import RelionStarFile, relion_metadata_fields
from .resolution_estimation import FourierRingCorrelation, FourierShellCorrelation
from .rotation import Rotation
from .units import ratio_to_decibel, voltage_to_wavelength, wavelength_to_voltage

from .bot_align import align_BO  # isort:skip
