from apb.application.foldseek.align import align_to_reference, create_reference_aligner
from apb.application.foldseek.base import (
    DEFAULT_CONVERTALIS_CONFIG,
    DEFAULT_SEARCH_CONFIG,
    convertalis,
    createdb,
    search,
)
from apb.application.foldseek.datatypes import FoldSeekConvertalisConfig, FoldSeekSearchConfig

__all__ = [
    "createdb",
    "search",
    "convertalis",
    "FoldSeekSearchConfig",
    "FoldSeekConvertalisConfig",
    "align_to_reference",
    "create_reference_aligner",
    "DEFAULT_CONVERTALIS_CONFIG",
    "DEFAULT_SEARCH_CONFIG",
]
