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extra/borg/libLSS/samplers/generic/generic_foreground_impl.cpp
extra/borg/libLSS/samplers/generic/generic_hmc_likelihood.hpp
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extra/borg/libLSS/samplers/generic/generic_meta_impl.cpp
extra/borg/libLSS/samplers/generic/generic_sigma8.cpp
extra/borg/libLSS/samplers/generic/generic_sigma8.hpp
extra/borg/libLSS/samplers/generic/generic_sigma8_second.cpp
extra/borg/libLSS/samplers/generic/generic_sigma8_second.hpp
extra/borg/libLSS/samplers/generic/generic_vobs_impl.cpp
extra/borg/libLSS/samplers/generic/impl_gaussian.cpp
extra/borg/libLSS/samplers/generic/impl_generic.cpp
extra/borg/libLSS/samplers/generic/impl_poisson.cpp
extra/borg/libLSS/samplers/generic/impl_robust.cpp
extra/borg/libLSS/samplers/generic/impl_skeleton.hpp
extra/borg/libLSS/samplers/generic/run_forward.cpp
extra/borg/libLSS/samplers/julia/julia_likelihood.cpp
extra/borg/libLSS/samplers/julia/julia_likelihood.hpp
extra/borg/libLSS/samplers/lya/base_lya_likelihood.cpp
extra/borg/libLSS/samplers/lya/base_lya_likelihood.hpp
extra/borg/libLSS/samplers/lya/hades_lya_likelihood.cpp
extra/borg/libLSS/samplers/lya/hades_lya_likelihood.hpp
extra/borg/libLSS/samplers/lya_rsd_qlpt/hades_lya_likelihood_rsd.cpp
extra/borg/libLSS/samplers/lya_rsd_qlpt/hades_lya_likelihood_rsd.hpp
extra/borg/libLSS/samplers/rgen/qnhmc/qnhmc_density_sampler.cpp
extra/borg/libLSS/samplers/rgen/qnhmc/qnhmc_density_sampler.hpp
extra/borg/libLSS/tests/benchmark_generic_likelihood.cpp
extra/borg/libLSS/tests/borg_forward.py_config
extra/borg/libLSS/tests/borg_gradients.py_config
extra/borg/libLSS/tests/borg_lpt_benchmark.cpp
extra/borg/libLSS/tests/borg_pm_benchmark.cpp
extra/borg/libLSS/tests/borg_vobs.py_config
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extra/borg/libLSS/tests/generic_los_gradient_test.cpp
extra/borg/libLSS/tests/julia_gradient_test.cpp
extra/borg/libLSS/tests/test_aux_attributes.cpp
extra/borg/libLSS/tests/test_bfgs_gaussian.cpp
extra/borg/libLSS/tests/test_borg_conv.cpp
extra/borg/libLSS/tests/test_borg_conv_gradient.cpp
extra/borg/libLSS/tests/test_borg_many_power_gradient.cpp
extra/borg/libLSS/tests/test_borg_poisson_power_gradient.cpp
extra/borg/libLSS/tests/test_broken_power_law.cpp
extra/borg/libLSS/tests/test_broken_power_law.cpp.expected
extra/borg/libLSS/tests/test_fmin.cpp
extra/borg/libLSS/tests/test_forward_velocity.cpp
extra/borg/libLSS/tests/test_fuse_reduce.cpp
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extra/borg/libLSS/tests/test_generic_likelihood_bias.cpp
extra/borg/libLSS/tests/test_generic_likelihood_foreground.cpp
extra/borg/libLSS/tests/test_generic_likelihood_s_field.cpp
extra/borg/libLSS/tests/test_ghost_planes.cpp
extra/borg/libLSS/tests/test_julia.jl
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extra/borg/libLSS/tests/test_julia_likelihood.cpp
extra/borg/libLSS/tests/test_lya_likelihood.cpp
extra/borg/libLSS/tests/test_many_power.cpp
extra/borg/libLSS/tests/test_part_swapper.cpp
extra/borg/libLSS/tests/test_patch_model.cpp
extra/borg/libLSS/tests/test_power_law_0.cpp
extra/borg/libLSS/tests/test_power_law_0.cpp.expected
extra/borg/libLSS/tests/test_power_law_1.cpp
extra/borg/libLSS/tests/test_power_law_1.cpp.expected
extra/borg/libLSS/tests/test_robust_poisson.cpp
extra/borg/libLSS/tests/test_voxel_poisson.cpp
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extra/borg/libLSS/tests/test_voxel_poisson_fail.cpp
extra/borg/libLSS/tests/tests.cmake
extra/borg/libLSS/tools/optimization/adam.hpp
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extra/borg/libLSS/tools/optimization/constant_hessian.hpp
extra/borg/libLSS/tools/optimization/fmin.hpp
extra/borg/libLSS/tools/optimization/line_search.hpp
extra/borg/libLSS/tools/optimization/newton.hpp
extra/borg/scripts/borg_tests.cmake
extra/borg/scripts/generate_vobs_tests.py
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extra/borg/src/bias_generator.cpp
extra/borg/src/bias_generator.hpp
extra/borg/src/borg2gadget3.cpp
extra/borg/src/borg_forward.cpp
extra/borg/src/borg_generic_bundle.hpp
extra/borg/src/cic_output.hpp
extra/borg/src/dmsheet_output.hpp
extra/borg/src/generic_hades_lya_bundle.hpp
extra/borg/src/hades_lya.cpp
extra/borg/src/hades_lya_bundle.hpp
extra/borg/src/hades_lya_bundle_init.hpp
extra/borg/src/hades_lya_init.hpp
extra/borg/src/mcmcfile_parsing.hpp
extra/borg/src/model_generator.cpp
extra/borg/src/model_generator.hpp
extra/borg/src/sampler_lya_base.cpp
extra/borg/src/tools.cmake
extra/borg/src/common/configuration_lya.hpp
extra/borg/src/common/preparation_lyman_alpha.hpp
extra/demo/libLSS/demo.cmake
extra/demo/libLSS/demo/demo.cpp
extra/demo/libLSS/tests/tests.cmake
extra/demo/src/tools.cmake
extra/dm_sheet/README.md
extra/dm_sheet/libLSS/dm_sheet.cmake
extra/dm_sheet/libLSS/physics/dm_sheet/dm_sheet.cpp
extra/dm_sheet/libLSS/physics/dm_sheet/dm_sheet.hpp
extra/dm_sheet/libLSS/physics/dm_sheet/tetrahedron_tools.hpp
extra/dm_sheet/libLSS/physics/dm_sheet/tools.hpp
extra/dm_sheet/libLSS/physics/velocity/velocity_sic.cpp
extra/dm_sheet/libLSS/physics/velocity/velocity_sic.hpp
extra/hades/libLSS/hades.cmake
extra/hades/libLSS/physics/branch.cpp
extra/hades/libLSS/physics/branch.hpp
extra/hades/libLSS/physics/chain_forward_model.cpp
extra/hades/libLSS/physics/chain_forward_model.hpp
extra/hades/libLSS/physics/forward_model.cpp
extra/hades/libLSS/physics/forward_model.hpp
extra/hades/libLSS/physics/haar.cpp
extra/hades/libLSS/physics/haar.hpp
extra/hades/libLSS/physics/hades_log.cpp
extra/hades/libLSS/physics/hades_log.hpp
extra/hades/libLSS/physics/hades_pt.cpp
extra/hades/libLSS/physics/hades_pt.hpp
extra/hades/libLSS/physics/hermitic.hpp
extra/hades/libLSS/physics/model_io.cpp
extra/hades/libLSS/physics/model_io.hpp
extra/hades/libLSS/physics/sum.cpp
extra/hades/libLSS/physics/sum.hpp
extra/hades/libLSS/physics/forwards/fnl.cpp
extra/hades/libLSS/physics/forwards/fnl.hpp
extra/hades/libLSS/physics/forwards/primordial.cpp
extra/hades/libLSS/physics/forwards/primordial.hpp
extra/hades/libLSS/physics/forwards/registry.cpp
extra/hades/libLSS/physics/forwards/registry.hpp
extra/hades/libLSS/physics/forwards/transfer_ehu.cpp
extra/hades/libLSS/physics/forwards/transfer_ehu.hpp
extra/hades/libLSS/physics/forwards/upgrade.cpp
extra/hades/libLSS/physics/forwards/upgrade.hpp
extra/hades/libLSS/physics/likelihoods/base.cpp
extra/hades/libLSS/physics/likelihoods/base.hpp
extra/hades/libLSS/physics/model_io/base.hpp
extra/hades/libLSS/physics/model_io/box.hpp
extra/hades/libLSS/physics/model_io/input.hpp
extra/hades/libLSS/physics/model_io/output.hpp
extra/hades/libLSS/samplers/bias_model_params.cpp
extra/hades/libLSS/samplers/bias_model_params.hpp
extra/hades/libLSS/samplers/model_params.cpp
extra/hades/libLSS/samplers/model_params.hpp
extra/hades/libLSS/samplers/core/generate_random_field.cpp
extra/hades/libLSS/samplers/core/generate_random_field.hpp
extra/hades/libLSS/samplers/core/gridLikelihoodBase.cpp
extra/hades/libLSS/samplers/core/gridLikelihoodBase.hpp
extra/hades/libLSS/samplers/core/likelihood.hpp
extra/hades/libLSS/samplers/core/simpleLikelihood.cpp
extra/hades/libLSS/samplers/core/simpleLikelihood.hpp
extra/hades/libLSS/samplers/core/splitLikelihood.cpp
extra/hades/libLSS/samplers/core/splitLikelihood.hpp
extra/hades/libLSS/samplers/hades/base_likelihood.cpp
extra/hades/libLSS/samplers/hades/base_likelihood.hpp
extra/hades/libLSS/samplers/hades/hades_linear_likelihood.cpp
extra/hades/libLSS/samplers/hades/hades_linear_likelihood.hpp
extra/hades/libLSS/samplers/rgen/density_sampler.hpp
extra/hades/libLSS/samplers/rgen/frozen/frozen_phase_density_sampler.cpp
extra/hades/libLSS/samplers/rgen/frozen/frozen_phase_density_sampler.hpp
extra/hades/libLSS/samplers/rgen/hmc/hmc_density_sampler.cpp
extra/hades/libLSS/samplers/rgen/hmc/hmc_density_sampler.hpp
extra/hades/libLSS/samplers/rgen/hmc/hmc_kinetic.tcc
extra/hades/libLSS/samplers/rgen/hmc/hmc_prior.tcc
extra/hades/libLSS/samplers/rgen/nuts/nuts_density_sampler.cpp
extra/hades/libLSS/samplers/rgen/nuts/nuts_density_sampler.hpp
extra/hades/libLSS/samplers/rgen/nuts/nuts_kinetic.tcc
extra/hades/libLSS/samplers/rgen/nuts/nuts_prior.tcc
extra/hades/libLSS/tests/generic_gradient_benchmark.cpp
extra/hades/libLSS/tests/generic_gradient_test.cpp
extra/hades/libLSS/tests/generic_mock.hpp
extra/hades/libLSS/tests/hades_gradients.py_config
extra/hades/libLSS/tests/setup_hades_test_run.cpp
extra/hades/libLSS/tests/setup_hades_test_run.hpp
extra/hades/libLSS/tests/test_ghost_array.cpp
extra/hades/libLSS/tests/test_hermiticity.cpp
extra/hades/libLSS/tests/test_modelio.cpp
extra/hades/libLSS/tests/test_symplectic.cpp
extra/hades/libLSS/tests/tests.cmake
extra/hades/libLSS/tests/data/gen_gradient_data.py
extra/hades/libLSS/tests/data/gradient_numbers.h5
extra/hades/libLSS/tools/hermiticity_fixup.cpp
extra/hades/libLSS/tools/hermiticity_fixup.hpp
extra/hades/libLSS/tools/symplectic_integrator.hpp
extra/hades/libLSS/tools/mpi/ghost_array.hpp
extra/hades/libLSS/tools/mpi/ghost_planes.hpp
extra/hades/scripts/generate_benchmark_tests.py
extra/hades/scripts/generate_tests_cmake.py
extra/hades/scripts/generate_tests_forward_models_cmake.py
extra/hades/scripts/gradient_tests.cmake
extra/hades/scripts/models.cmake
extra/hades/src/generic_hades_bundle.hpp
extra/hades/src/hades3.cpp
extra/hades/src/hades_bundle.hpp
extra/hades/src/hades_bundle_init.hpp
extra/hades/src/hades_mock_gen.hpp
extra/hades/src/likelihood_info.cpp
extra/hades/src/likelihood_info.hpp
extra/hades/src/setup_models.cpp
extra/hades/src/setup_models.hpp
extra/hades/src/tools.cmake
extra/hmclet/README.md
extra/hmclet/example/2mpp.ini.txt
extra/hmclet/example/2mpp_TF.ini.txt
extra/hmclet/example/test_like.jl
extra/hmclet/example/test_like_TF.jl
extra/hmclet/julia_test_framework/test_bias.jl
extra/hmclet/libLSS/hmclet.cmake
extra/hmclet/libLSS/hmclet/dense_mass.cpp
extra/hmclet/libLSS/hmclet/dense_mass.hpp
extra/hmclet/libLSS/hmclet/diagonal_mass.cpp
extra/hmclet/libLSS/hmclet/diagonal_mass.hpp
extra/hmclet/libLSS/hmclet/hmclet.cpp
extra/hmclet/libLSS/hmclet/hmclet.hpp
extra/hmclet/libLSS/hmclet/hmclet_qnhmc.cpp
extra/hmclet/libLSS/hmclet/hmclet_qnhmc.hpp
extra/hmclet/libLSS/hmclet/julia_hmclet.cpp
extra/hmclet/libLSS/hmclet/julia_hmclet.hpp
extra/hmclet/libLSS/hmclet/julia_slice.cpp
extra/hmclet/libLSS/hmclet/julia_slice.hpp
extra/hmclet/libLSS/hmclet/mass_burnin.cpp
extra/hmclet/libLSS/hmclet/mass_burnin.hpp
extra/hmclet/libLSS/hmclet/mass_saver.hpp
extra/hmclet/libLSS/tests/convHMC.jl
extra/hmclet/libLSS/tests/network.jl
extra/hmclet/libLSS/tests/test_conv_like.jl
extra/hmclet/libLSS/tests/test_dense_mass.cpp
extra/hmclet/libLSS/tests/test_hmclet.cpp
extra/hmclet/libLSS/tests/test_julia.jl
extra/hmclet/libLSS/tests/test_julia_hmclet.cpp
extra/hmclet/libLSS/tests/test_network.cpp
extra/hmclet/libLSS/tests/tests.cmake
extra/hmclet/libLSS/tests/network/TF_conv.jl
extra/hmclet/libLSS/tests/network/TF_likelihood.jl
extra/hmclet/src/hades_julia3.cpp
extra/hmclet/src/julia_bundle.hpp
extra/hmclet/src/julia_bundle_init.hpp
extra/hmclet/src/julia_mock_gen.hpp
extra/hmclet/src/tools.cmake
extra/python/python.cmake
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extra/python/example/run_altair.py
extra/python/example/run_forward.py
extra/python/example/test_gradient_cic.py
extra/python/example/test_likelihood.py
extra/python/example/model/example_jax.py
extra/python/example/velocity/test_gradient_cic.py
extra/python/python/CMakeLists.txt
extra/python/python/_borg.cpp
extra/python/python/_borg.version
extra/python/python/any_wrapper.cpp
extra/python/python/base.cpp
extra/python/python/bind.cpp
extra/python/python/py_mpi.hpp
extra/python/python/pybias.cpp
extra/python/python/pybias.hpp
extra/python/python/pyborg.hpp
extra/python/python/pyborg_doc.hpp
extra/python/python/pycosmo.cpp
extra/python/python/pyforward.cpp
extra/python/python/pyforward.hpp
extra/python/python/pyforward_all.cpp
extra/python/python/pyforward_borg.cpp
extra/python/python/pyfuse.hpp
extra/python/python/pylikelihood.cpp
extra/python/python/pylikelihood_wrap.hpp
extra/python/python/pysamplers.cpp
extra/python/python/pyvelocity.cpp
extra/python/python/pyvelocity.hpp
extra/python/python/aquila_borg/__init__.py
extra/python/python/aquila_borg/borg_native.py
extra/python/python/aquila_borg/dft.py
extra/python/python/aquila_borg/utils.py
extra/python/python/borg/__init__.py
extra/python/python/doc/aquila_borg.cosmo.rst
extra/python/python/doc/aquila_borg.forward.BORGForwardModel.rst
extra/python/python/doc/aquila_borg.forward.BaseForwardModel.rst
extra/python/python/doc/aquila_borg.forward.BoxModel.rst
extra/python/python/doc/aquila_borg.forward.ChainForwardModel.rst
extra/python/python/doc/aquila_borg.forward.models.rst
extra/python/python/doc/aquila_borg.forward.rst
extra/python/python/doc/aquila_borg.forward.velocity.VelocityBase.rst
extra/python/python/doc/aquila_borg.forward.velocity.rst
extra/python/python/doc/aquila_borg.likelihood.rst
extra/python/python/doc/aquila_borg.samplers.rst
extra/python/python/doc/borg_base.Console.rst
extra/python/python/doc/borg_base.rst
extra/python/python/doc/convert.py
extra/python/python/example/test_borg.py
extra/python/python/example/test_borg2.py
extra/python/python/example/test_borg_gpu.py
extra/python/python/example/test_borg_proj.py
extra/python/src/hades_python.cpp
extra/python/src/python_bundle.hpp
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extra/python/src/python_bundle_init.hpp
extra/python/src/python_mock_gen.cpp
extra/python/src/python_mock_gen.hpp
extra/python/src/tools.cmake
libLSS/CMakeLists.txt
libLSS/ares_version.cpp.in
libLSS/ares_version.hpp
libLSS/data/angtools.hpp
libLSS/data/base.hpp
libLSS/data/galaxies.hpp
libLSS/data/integer_window3d.hpp
libLSS/data/linear_selection.hpp
libLSS/data/postools.hpp
libLSS/data/projection.hpp
libLSS/data/schechter_completeness.hpp
libLSS/data/spectro_gals.hpp
libLSS/data/spectro_gals.tcc
libLSS/data/survey_load_bin.hpp
libLSS/data/survey_load_txt.hpp
libLSS/data/toto.cpp
libLSS/data/window3d.hpp
libLSS/data/window3d_post.hpp
libLSS/mcmc/global_state.hpp
libLSS/mcmc/state_element.cpp
libLSS/mcmc/state_element.hpp
libLSS/mcmc/state_sync.hpp
libLSS/mpi/generic_mpi.hpp
libLSS/mpi/fake_mpi/mpi_communication.cpp
libLSS/mpi/fake_mpi/mpi_communication.hpp
libLSS/mpi/fake_mpi/mpi_type_translator.hpp
libLSS/mpi/real_mpi/mpi_communication.cpp
libLSS/mpi/real_mpi/mpi_communication.hpp
libLSS/mpi/real_mpi/mpi_mutex.cpp
libLSS/mpi/real_mpi/mpi_type_translator.hpp
libLSS/physics/class_cosmo.cpp
libLSS/physics/class_cosmo.hpp
libLSS/physics/classic_cic.hpp
libLSS/physics/classic_gpot.hpp
libLSS/physics/cosmo.cpp
libLSS/physics/cosmo.hpp
libLSS/physics/cosmo_power.hpp
libLSS/physics/generic_cic.hpp
libLSS/physics/modified_ngp.hpp
libLSS/physics/modified_ngp_smooth.hpp
libLSS/physics/openmp_cic.hpp
libLSS/samplers/ares/ares_bias.hpp
libLSS/samplers/ares/gibbs_messenger.cpp
libLSS/samplers/ares/gibbs_messenger.hpp
libLSS/samplers/ares/linbias_sampler.cpp
libLSS/samplers/ares/linbias_sampler.hpp
libLSS/samplers/ares/powerspectrum_a_sampler.cpp
libLSS/samplers/ares/powerspectrum_a_sampler.hpp
libLSS/samplers/ares/powerspectrum_b_sampler.cpp
libLSS/samplers/ares/powerspectrum_b_sampler.hpp
libLSS/samplers/ares/powerspectrum_c_sampler.cpp
libLSS/samplers/ares/powerspectrum_c_sampler.hpp
libLSS/samplers/ares/synthetic_selection.cpp
libLSS/samplers/ares/synthetic_selection.hpp
libLSS/samplers/core/gaussian_ratio.tcc
libLSS/samplers/core/gig_sampler.cc
libLSS/samplers/core/gig_sampler.hpp
libLSS/samplers/core/main_loop.cpp
libLSS/samplers/core/main_loop.hpp
libLSS/samplers/core/markov.hpp
libLSS/samplers/core/powerspec_tools.cpp
libLSS/samplers/core/powerspec_tools.hpp
libLSS/samplers/core/ran_gig.cc
libLSS/samplers/core/ran_gig.h
libLSS/samplers/core/random_number.hpp
libLSS/samplers/core/types_samplers.hpp
libLSS/samplers/rgen/gsl_miser.hpp
libLSS/samplers/rgen/gsl_random_number.hpp
libLSS/samplers/rgen/slice_sweep.hpp
libLSS/tests/CMakeLists.txt
libLSS/tests/dummy_file.cpp
libLSS/tests/plot_grav.py
libLSS/tests/ref_pm.h5
libLSS/tests/testFramework.cpp
libLSS/tests/testFramework.hpp
libLSS/tests/test_array.cpp
libLSS/tests/test_auto_interpolator.cpp
libLSS/tests/test_auto_interpolator.cpp.expected
libLSS/tests/test_cg.cpp
libLSS/tests/test_cic.cpp
libLSS/tests/test_cic_adjoint.cpp
libLSS/tests/test_class_interface.cpp
libLSS/tests/test_console.cpp
libLSS/tests/test_cosmo_expansion.cpp
libLSS/tests/test_cosmo_expansion.cpp.expected
libLSS/tests/test_cpu_feature.cpp
libLSS/tests/test_fuse_wrapper.cpp
libLSS/tests/test_fused_array.cpp
libLSS/tests/test_fused_cond.cpp
libLSS/tests/test_gig.cpp
libLSS/tests/test_gradient_supersampling.cpp
libLSS/tests/test_has_member.cpp
libLSS/tests/test_hdf5_buffered.cpp
libLSS/tests/test_los_projector.cpp
libLSS/tests/test_messenger.cpp
libLSS/tests/test_messenger2.cpp
libLSS/tests/test_messenger3.cpp
libLSS/tests/test_mngp.cpp
libLSS/tests/test_overload.cpp
libLSS/tests/test_proj.cpp
libLSS/tests/test_r3d.cpp
libLSS/tests/test_rgen.cpp
libLSS/tests/test_schechter.cpp
libLSS/tests/test_slice_sweep.cpp
libLSS/tests/test_slice_sweep_double.cpp
libLSS/tests/test_stl_container.cpp
libLSS/tests/test_supersampling.cpp
libLSS/tests/test_tuple.cpp
libLSS/tests/test_uninit.cpp
libLSS/tests/test_window3d.cpp
libLSS/tests/data/gen_reference_data.py
libLSS/tests/data/reference_data.h5
libLSS/tools/align_helper.hpp
libLSS/tools/allocator_policy.hpp
libLSS/tools/array_concepts.hpp
libLSS/tools/array_tools.hpp
libLSS/tools/auto_interpolator.hpp
libLSS/tools/bisection.hpp
libLSS/tools/checkmem.hpp
libLSS/tools/color_mod.hpp
libLSS/tools/compiler_tools.hpp
libLSS/tools/console.cpp
libLSS/tools/console.hpp
libLSS/tools/defer.hpp
libLSS/tools/domains.cpp
libLSS/tools/domains.hpp
libLSS/tools/errors.hpp
libLSS/tools/fftw_allocator.cpp
libLSS/tools/fftw_allocator.hpp
libLSS/tools/function_name.hpp
libLSS/tools/fused_array.hpp
libLSS/tools/fused_assign.hpp
libLSS/tools/fused_cond.hpp
libLSS/tools/fused_masked_assign.hpp
libLSS/tools/fused_reduce.hpp
libLSS/tools/fusewrapper.hpp
libLSS/tools/gslIntegrate.hpp
libLSS/tools/gsl_error.cpp
libLSS/tools/gsl_error.hpp
libLSS/tools/hdf5_buffered_write.hpp
libLSS/tools/hdf5_error.cpp
libLSS/tools/hdf5_error.hpp
libLSS/tools/hdf5_scalar.hpp
libLSS/tools/hdf5_type.hpp
libLSS/tools/is_stl_container.hpp
libLSS/tools/itertools.hpp
libLSS/tools/log_traits.cpp
libLSS/tools/log_traits.hpp
libLSS/tools/memusage.cpp
libLSS/tools/memusage.hpp
libLSS/tools/mpi_fftw_helper.hpp
libLSS/tools/nary_arrays.hpp
libLSS/tools/openmp.hpp
libLSS/tools/overload.hpp
libLSS/tools/phoenix_vars.hpp
libLSS/tools/ptree_proxy.hpp
libLSS/tools/ptree_proxy_map.hpp
libLSS/tools/ptree_translators.hpp
libLSS/tools/ptree_vectors.hpp
libLSS/tools/push_operators.hpp
libLSS/tools/ref_tools.hpp
libLSS/tools/sigcatcher.cpp
libLSS/tools/sigcatcher.hpp
libLSS/tools/static_auto.hpp
libLSS/tools/static_init.cpp
libLSS/tools/static_init.hpp
libLSS/tools/string_tools.cpp
libLSS/tools/string_tools.hpp
libLSS/tools/timing_db.hpp
libLSS/tools/tuple_helper.hpp
libLSS/tools/uninitialized_type.hpp
libLSS/tools/cpu/feature_check.hpp
libLSS/tools/cpu/feature_check_gnuc.hpp
libLSS/tools/cpu/feature_check_other.hpp
libLSS/tools/fuse/healpix.hpp
libLSS/tools/fuse/operators.hpp
libLSS/tools/mpi_fftw/copy_utils.hpp
libLSS/tools/mpi_fftw/copy_utils_degrade.hpp
libLSS/tools/mpi_fftw/copy_utils_upgrade.hpp
libLSS/tools/mpi_fftw/impl_3d.hpp
libLSS/tools/mpi_fftw/nyquist_downgrade.hpp
libLSS/tools/mpi_fftw/nyquist_upgrade.hpp
libLSS/tools/optimization/array_helper.hpp
libLSS/tools/optimization/cg.hpp
libLSS/tools/powerspectrum/measure.hpp
scripts/Aquila_tutorial_0.ipynb
scripts/check_gradients.py
scripts/check_likelihood_trace.py
scripts/dump_initial_field.py
scripts/merge_mpi_restart.py
scripts/migrate_restart.py
scripts/mod_restart_file.py
scripts/regraft_run.py
scripts/test_analysis.py
scripts/ares_tools/__init__.py
scripts/ares_tools/read_all_h5.py
scripts/ares_tools/analysis/__init__.py
scripts/ares_tools/analysis/analysis.py
scripts/ares_tools/visu/__init__.py
scripts/ares_tools/visu/vtktools.py
scripts/ini_generator/gen_subcat_conf.py
scripts/ini_generator/header.ini
scripts/ini_generator/template_sdss_main.py
scripts/lic_plot/lic.py
scripts/lic_plot/lic_demo.py
scripts/lic_plot/lic_internal.c
scripts/lic_plot/lic_internal.pyx
scripts/lic_plot/setup.py
scripts/misc/check_bias.py
scripts/misc/check_integrator.py
scripts/misc/check_velocities.py
scripts/misc/convert_2m++.py
scripts/misc/plot_power.py
scripts/misc/plot_void.py
scripts/notebooks/analyse_resim.ipynb
scripts/notebooks/src/curl.py
scripts/notebooks/src/special_regions.py
scripts/old_analysis/analysis.py
scripts/quasar/QUASAR.txt
scripts/quasar/Quasar.ini
scripts/quasar/cmass_selection.txt
scripts/quasar/gen_selection_qso.py
scripts/quasar/one.fits
scripts/quasar/quasar_selection.txt
scripts/sample_analysis/build_means.py
scripts/sample_analysis/show_log_likelihood.py
src/CMakeLists.txt
src/ares3.cpp
src/ares_bundle.hpp
src/ares_bundle_init.hpp
src/ares_init.hpp
src/ares_mock_gen.hpp
src/common/configuration.hpp
src/common/foreground.hpp
src/common/ketable.hpp
src/common/mock_gen.hpp
src/common/piecewise_selection.hpp
src/common/preparation.hpp
src/common/preparation_simulation.hpp
src/common/preparation_tools.hpp
src/common/preparation_types.hpp
src/common/projection.hpp
src/common/sampler_base.cpp
src/common/survey_cutters.hpp