Metadata-Version: 1.1
Name: aprdna
Version: 0.1.0
Summary: Analizer of periodic repetitions in DNA
Home-page: UNKNOWN
Author: Enrique Pérez
Author-email: enriquepablo@gmail.com
License: bsd
Description: Analyzer of periodic repetitions in sequences of DNA
        ====================================================
        
        Use aprdna to look for periodic repetitions in sequences of DNA, in the GenBank format.
        
        Install
        -------
        
        Use pip to install the program:
        
        .. code-block:: bash
        
          $ pip install aprdna
        
        Usage
        -----
        
        usage: aprdna [-h] [-a NAME] [-p PERIOD] [-t TOLERANCE] [-m LENGTH] [-r THROTTLE] path
        
        Search for repetitions of nucleotides.
        
        positional arguments:
          path                  Path to Sequence file
        
        optional arguments:
          -h, --help            show help message and exit
          -p PERIOD, --period PERIOD
                                Periodicity of the repetition
          -t TOLERANCE, --tolerance TOLERANCE
                                Tolerance window for the repetition
          -m LENGTH, --length LENGTH
                                Minimal repetition length
          -r THROTTLE, --throttle THROTTLE
                                Stop after so many fragments
        
Platform: UNKNOWN
Classifier: Programming Language :: Python
