MANIFEST.in
README.md
setup.py
ancIBD/__init__.py
ancIBD/ancIBD_summary.py
ancIBD/cfunc.c
ancIBD/cfunc.pyx
ancIBD/emission.py
ancIBD/hmm.py
ancIBD/loaddata.py
ancIBD/main.py
ancIBD/postprocessing.py
ancIBD/run.py
ancIBD/run_ancIBD.py
ancIBD/transition.py
ancIBD.egg-info/PKG-INFO
ancIBD.egg-info/SOURCES.txt
ancIBD.egg-info/dependency_links.txt
ancIBD.egg-info/entry_points.txt
ancIBD.egg-info/requires.txt
ancIBD.egg-info/top_level.txt
ancIBD/.ipynb_checkpoints/cfunc-checkpoint.pyx
ancIBD/IO/__init__.py
ancIBD/IO/batch_run.py
ancIBD/IO/h5_duplicates.py
ancIBD/IO/h5_load.py
ancIBD/IO/h5_modify.py
ancIBD/IO/h5_qc.py
ancIBD/IO/ind_ibd.py
ancIBD/IO/prepare_h5.py
ancIBD/ibd_stats/__init__.py
ancIBD/ibd_stats/funcs.py
ancIBD/plot/__init__.py
ancIBD/plot/plot_df.py
ancIBD/plot/plot_karyotype.py
ancIBD/plot/plot_opphomos.py
ancIBD/plot/plot_posterior.py