LICENSE.txt
MANIFEST.in
README.md
setup.py
alphastats/DataSet.py
alphastats/DataSet_Pathway.py
alphastats/DataSet_Plot.py
alphastats/DataSet_Preprocess.py
alphastats/DataSet_Statistics.py
alphastats/__init__.py
alphastats/__main__.py
alphastats/cli.py
alphastats/load_data.py
alphastats/utils.py
alphastats.egg-info/PKG-INFO
alphastats.egg-info/SOURCES.txt
alphastats.egg-info/dependency_links.txt
alphastats.egg-info/entry_points.txt
alphastats.egg-info/requires.txt
alphastats.egg-info/top_level.txt
alphastats/data/contaminations.txt
alphastats/gui/AlphaPeptStats.py
alphastats/gui/__init__.py
alphastats/gui/alphapeptstats_logo.png
alphastats/gui/alphastats_logo.png
alphastats/gui/alphastats_logo_2.png
alphastats/gui/gui.py
alphastats/gui/requirements.txt
alphastats/gui/.streamlit/config.toml
alphastats/gui/pages/02_Import Data.py
alphastats/gui/pages/03_Data Overview.py
alphastats/gui/pages/03_Preprocessing.py
alphastats/gui/pages/04_Analysis.py
alphastats/gui/pages/06_Results.py
alphastats/gui/sample_data/metadata.xlsx
alphastats/gui/sample_data/proteinGroups.txt
alphastats/gui/utils/analysis_helper.py
alphastats/gui/utils/options.py
alphastats/gui/utils/software_options.py
alphastats/gui/utils/ui_helper.py
alphastats/loader/AlphaPeptLoader.py
alphastats/loader/BaseLoader.py
alphastats/loader/DIANNLoader.py
alphastats/loader/FragPipeLoader.py
alphastats/loader/MaxQuantLoader.py
alphastats/loader/SpectronautLoader.py
alphastats/loader/__init__.py
alphastats/loader/mzTabLoader.py
alphastats/multicova/__init__.py
alphastats/multicova/multicova.py
alphastats/plots/ClusterMap.py
alphastats/plots/DimensionalityReduction.py
alphastats/plots/IntensityPlot.py
alphastats/plots/PlotUtils.py
alphastats/plots/SampleHistogram.py
alphastats/plots/VolcanoPlot.py
alphastats/plots/__init__.py
alphastats/statistics/Anova.py
alphastats/statistics/DifferentialExpressionAnalysis.py
alphastats/statistics/MultiCovaAnalysis.py
alphastats/statistics/StatisticUtils.py
tests/test_DataSet.py
tests/test_DataSet_Pathway.py
tests/test_loaders.py