MANIFEST.in
Makefile
README.md
requirements.txt
setup.cfg
setup.py
test_requirements.txt
allensdk/__init__.py
allensdk/deprecated.py
allensdk.egg-info/PKG-INFO
allensdk.egg-info/SOURCES.txt
allensdk.egg-info/dependency_links.txt
allensdk.egg-info/requires.txt
allensdk.egg-info/top_level.txt
allensdk/api/__init__.py
allensdk/api/api.py
allensdk/api/cache.py
allensdk/api/queries/__init__.py
allensdk/api/queries/annotated_section_data_sets_api.py
allensdk/api/queries/biophysical_api.py
allensdk/api/queries/brain_observatory_api.py
allensdk/api/queries/cell_types_api.py
allensdk/api/queries/connected_services.py
allensdk/api/queries/glif_api.py
allensdk/api/queries/grid_data_api.py
allensdk/api/queries/image_download_api.py
allensdk/api/queries/mouse_connectivity_api.py
allensdk/api/queries/ontologies_api.py
allensdk/api/queries/rma_api.py
allensdk/api/queries/rma_pager.py
allensdk/api/queries/rma_template.py
allensdk/api/queries/svg_api.py
allensdk/api/queries/synchronization_api.py
allensdk/api/queries/tree_search_api.py
allensdk/brain_observatory/__init__.py
allensdk/brain_observatory/brain_observatory_exceptions.py
allensdk/brain_observatory/brain_observatory_plotting.py
allensdk/brain_observatory/circle_plots.py
allensdk/brain_observatory/demixer.py
allensdk/brain_observatory/dff.py
allensdk/brain_observatory/drifting_gratings.py
allensdk/brain_observatory/findlevel.py
allensdk/brain_observatory/locally_sparse_noise.py
allensdk/brain_observatory/natural_movie.py
allensdk/brain_observatory/natural_scenes.py
allensdk/brain_observatory/observatory_plots.py
allensdk/brain_observatory/r_neuropil.py
allensdk/brain_observatory/roi_masks.py
allensdk/brain_observatory/session_analysis.py
allensdk/brain_observatory/static_gratings.py
allensdk/brain_observatory/stimulus_analysis.py
allensdk/brain_observatory/stimulus_info.py
allensdk/brain_observatory/receptive_field_analysis/__init__.py
allensdk/brain_observatory/receptive_field_analysis/chisquarerf.py
allensdk/brain_observatory/receptive_field_analysis/eventdetection.py
allensdk/brain_observatory/receptive_field_analysis/fit_parameters.py
allensdk/brain_observatory/receptive_field_analysis/fitgaussian2D.py
allensdk/brain_observatory/receptive_field_analysis/postprocessing.py
allensdk/brain_observatory/receptive_field_analysis/receptive_field.py
allensdk/brain_observatory/receptive_field_analysis/tools.py
allensdk/brain_observatory/receptive_field_analysis/utilities.py
allensdk/brain_observatory/receptive_field_analysis/visualization.py
allensdk/config/__init__.py
allensdk/config/manifest.py
allensdk/config/manifest_builder.py
allensdk/config/app/__init__.py
allensdk/config/app/application_config.py
allensdk/config/app/logging.conf
allensdk/config/model/__init__.py
allensdk/config/model/description.py
allensdk/config/model/description_parser.py
allensdk/config/model/formats/__init__.py
allensdk/config/model/formats/hdf5_util.py
allensdk/config/model/formats/json_description_parser.py
allensdk/config/model/formats/pycfg_description_parser.py
allensdk/core/__init__.py
allensdk/core/brain_observatory_cache.py
allensdk/core/brain_observatory_nwb_data_set.py
allensdk/core/cell_types_cache.py
allensdk/core/dat_utilities.py
allensdk/core/json_utilities.py
allensdk/core/mouse_connectivity_cache.py
allensdk/core/nwb_data_set.py
allensdk/core/ontology.py
allensdk/core/reference_space.py
allensdk/core/simple_tree.py
allensdk/core/structure_tree.py
allensdk/core/swc.py
allensdk/ephys/__init__.py
allensdk/ephys/ephys_extractor.py
allensdk/ephys/ephys_features.py
allensdk/ephys/extract_cell_features.py
allensdk/ephys/feature_extractor.py
allensdk/model/__init__.py
allensdk/model/biophys_sim/__init__.py
allensdk/model/biophys_sim/bps_command.py
allensdk/model/biophys_sim/config.py
allensdk/model/biophys_sim/logging.conf
allensdk/model/biophys_sim/manifest_default.json
allensdk/model/biophys_sim/neuron/__init__.py
allensdk/model/biophys_sim/neuron/hoc_utils.py
allensdk/model/biophys_sim/scripts/__init__.py
allensdk/model/biophys_sim/scripts/bps
allensdk/model/biophysical/__init__.py
allensdk/model/biophysical/logging.conf
allensdk/model/biophysical/run_simulate.py
allensdk/model/biophysical/runner.py
allensdk/model/biophysical/utils.py
allensdk/model/glif/__init__.py
allensdk/model/glif/glif_neuron.py
allensdk/model/glif/glif_neuron_methods.py
allensdk/model/glif/simulate_neuron.py
allensdk/morphology/__init__.py
allensdk/morphology/validate_swc.py
allensdk/test/glif_tests.py
allensdk/test/test_deprecated.py
allensdk/test/api/test_annotated_section_data_set_api.py
allensdk/test/api/test_api.py
allensdk/test/api/test_brain_observatory_api.py
allensdk/test/api/test_cache.py
allensdk/test/api/test_cacheable.py
allensdk/test/api/test_file_download.py
allensdk/test/api/test_glif_api.py
allensdk/test/api/test_grid_data_api.py
allensdk/test/api/test_image_download_api.py
allensdk/test/api/test_mouse_connectivity_api.py
allensdk/test/api/test_ontologies_api.py
allensdk/test/api/test_pager.py
allensdk/test/api/test_rma_template.py
allensdk/test/api/test_svg_api.py
allensdk/test/api/test_synchronization_api.py
allensdk/test/api/test_tree_search_api.py
allensdk/test/brain_observatory/test_circle_plots.py
allensdk/test/brain_observatory/test_dff.py
allensdk/test/brain_observatory/test_drifting_gratings.py
allensdk/test/brain_observatory/test_locally_sparse_noise.py
allensdk/test/brain_observatory/test_natural_movie.py
allensdk/test/brain_observatory/test_natural_scenes.py
allensdk/test/brain_observatory/test_notebook.py
allensdk/test/brain_observatory/test_observatory_plots.py
allensdk/test/brain_observatory/test_observatory_plots_data.json
allensdk/test/brain_observatory/test_roi_masks.py
allensdk/test/brain_observatory/test_session_analysis.py
allensdk/test/brain_observatory/test_static_gratings.py
allensdk/test/brain_observatory/test_stimulus_analysis.py
allensdk/test/brain_observatory/test_stimulus_info.py
allensdk/test/config/test_config_single_file_json.py
allensdk/test/config/test_json_comments.py
allensdk/test/config/test_manifest.py
allensdk/test/config/test_multi_file_config.py
allensdk/test/config/test_pyconfig_parser.py
allensdk/test/core/nwb_ephys_files.txt
allensdk/test/core/nwb_files.txt
allensdk/test/core/test_brain_observatory_cache.py
allensdk/test/core/test_brain_observatory_nwb_data_set.py
allensdk/test/core/test_cell_filters.py
allensdk/test/core/test_cell_types_cache_unit.py
allensdk/test/core/test_json_utilities.py
allensdk/test/core/test_mouse_connectivity_cache.py
allensdk/test/core/test_mouse_connectivity_notebook.py
allensdk/test/core/test_nwb_data_set.py
allensdk/test/core/test_reference_space.py
allensdk/test/core/test_reference_space_notebook.py
allensdk/test/core/test_simple_tree.py
allensdk/test/core/test_structure_tree.py
allensdk/test/ephys/test_extractor.py
allensdk/test/ephys/test_features.py
allensdk/test/ephys/data/spike_test_high_init_dvdt.txt
allensdk/test/ephys/data/spike_test_pair.txt
allensdk/test/ephys/data/spike_test_var_dt.txt
allensdk/test/model/test_biophysical_perisomatic.py
allensdk/test/model/test_glif.py
allensdk/test_utilities/__init__.py
allensdk/test_utilities/temp_dir.py