ALLCools/__init__.py,sha256=oldLQVptd3VWqK027w6luOCjSwqsXUhQ0Ok6rp7lEuU,154
ALLCools/__main__.py,sha256=PEUlnR7UOqqRbzEDQpT6sOyGhqwlp7ii5-cvjCFEr5A,27909
ALLCools/_allc_to_bigwig.py,sha256=Vspqlyh0T8Qj9UnwAVXswlrcs1COPE_HNVvKU3T36Ic,8723
ALLCools/_allc_to_region_count.py,sha256=RXCADWVSnqD7nxLbembPnbL3SCf4MHMiZyOV0x_TVEY,14129
ALLCools/_bam_to_allc.py,sha256=F6WHSwXdQgo9ySmfeCtN7uxhHC1naRCQKCH9lFKfXjE,18951
ALLCools/_doc.py,sha256=RRsB0Na-ugGc7OFx9_MG5rfdeF4JTaJH-n5F0fwNRCY,9228
ALLCools/_extract_allc.py,sha256=bbRUhSdh7ZwXtrwxKO3jF3jtJO5zxX10YKW4-zMB_CA,14869
ALLCools/_merge_allc.py,sha256=dtkEkIM1VAL2aXZoAGTvYulY1sqdyoKqDr4EfnTJ5p8,19061
ALLCools/_open.py,sha256=KLxp97TeyIyukoFNSohDDAfwL0ZqPgHhRcQYyWlkZEQ,15305
ALLCools/api.py,sha256=5pZAxWiv5BSp6-pxh_fQTpriftQXyaYQzfSPqK2dgSo,624
ALLCools/table_to_allc.py,sha256=7bQNkxPBuqYlK2vmwszf8NGHtA3hE2YvhAYT1cIu8tk,11318
ALLCools/utilities.py,sha256=r8o8xUf4DX9aPPZu6bvPcL7lRVVHGrKvksAGdXpQPjs,18046
ALLCools/abc/__init__.py,sha256=6fbagU5uEtFKMJDkXAeZtc7qr_HL3-lHs5xDRCStRUY,32
ALLCools/abc/abc_score.py,sha256=UhHIxMWpyEOFvTtWemCUtmHbtoIURmMp5cCBFIDC_A4,13031
ALLCools/clustering/ClusterMerging.py,sha256=4aFoKn1BLbZep3H9k4RtyGBmwQS5OUeZu7gtDH93t1A,5835
ALLCools/clustering/ConsensusClustering.py,sha256=c3rd3zjDZvsb-kDb848UT2w04JWWrFNvS1RV5vgpQ1c,29849
ALLCools/clustering/__init__.py,sha256=WfaGuQgmx7J7-N2qymG__9fkRadQGsdkTnd4mPzSBmg,638
ALLCools/clustering/art_of_tsne.py,sha256=chmnMnAZWKxOXTTwsO7Ng-CFUYKSeD7Tgd1vCsBgy1c,6057
ALLCools/clustering/balanced_pca.py,sha256=QUm3XIwOcqPsIwo9gxVO3JgqwW_4_rTQMRK-xaFoc4c,12785
ALLCools/clustering/chromatin_conformation.py,sha256=98mk26ms8FLBiazKzY2TjcvBwR8IQJuPYXzI3EduPSE,910
ALLCools/clustering/dmg.py,sha256=6njBd4pT_WzdYsygoPkoJCGf-9V7BeRTk_1t_e8n8mU,17669
ALLCools/clustering/incremental_pca.py,sha256=6h8MoiguUfc-6iOB4l_Oq0Nzh5KxMa7I8-Hn0w4nSWI,7821
ALLCools/clustering/lsi.py,sha256=9LTaFLvMU3brO-zc5wgukukD0tihcwLBnb6hzmCo4_A,5944
ALLCools/clustering/mcad.py,sha256=e8WoOCOeOaXQV_8CU37QulsTcwkc1evobMwJXNHAuyA,3696
ALLCools/clustering/pvclust.py,sha256=VVOFP5gV0CYM9iIBYpVpPxIAcnNYfw36n7Tnt2WeUEk,5578
ALLCools/clustering/rutilities.py,sha256=XPz9E2wtjKaY3cbl549uXWqpuYhbg-aOaAUuoHQi57M,643
ALLCools/clustering/doublets/__init__.py,sha256=lunlPtupXStUNjFjYL7d6v-16YDH0_im81kEHhJfUBA,86
ALLCools/clustering/doublets/coverage_doublets.py,sha256=cW81ginn3aiq3-3QcIbLabb_vs4m5lPc3WFIWlIsRy0,6700
ALLCools/clustering/doublets/scrublet.py,sha256=G_JQEroWuonXtm1idJbJR5VLW87ZzTHpxYH3k1dHCC8,10214
ALLCools/clustering/feature_selection/__init__.py,sha256=FugVtpIdnURa82UyOXPtNBn3xWbNyBPOGZrx8g12EAg,113
ALLCools/clustering/feature_selection/feature_enrichment.py,sha256=60kuiFexlrKKyETigKu9en5io68DOKhKZmiu_UiH_fc,10574
ALLCools/clustering/feature_selection/gene_panel_design.py,sha256=H4y6R9AvlHauKFNgG4NLj_8z_4GZwHdosi_tRtq6UQw,3393
ALLCools/count_matrix/__init__.py,sha256=zoW7ulCiyCbQ5cWHg80MvPF_dcorMfy1Kbpu5JPG58k,66
ALLCools/count_matrix/atac.py,sha256=79XaLgoCVbeJNxmcrdcxnFhaiHY15-6rux8A9eXErvI,114
ALLCools/count_matrix/base_ds.py,sha256=eFc5_owsX5RZRq5phXaTxfv0525OEtaa_fHhTlVC2ac,23961
ALLCools/count_matrix/dataset.py,sha256=V1EiE5yKumcjlpSL31BBmdI9brgVAR2VkmXM83EWtA8,14453
ALLCools/count_matrix/h5ad.py,sha256=_AlLuIgBZaSWWu-gfcoGHwf_yW3NwqjHzdY8z3KUp9A,10291
ALLCools/count_matrix/mcad.py,sha256=ZLSOzanEfasVsEwm3hwqvbFDSmxviMztIUqDfAFCleU,5839
ALLCools/count_matrix/mcds.py,sha256=c_5fE0wTfKUbasO40rY78nlO4hsAoODU5TPSXu5mbXM,18533
ALLCools/count_matrix/snap.py,sha256=6-r_VxBH1ushqv_aXz-HwHf8Bsddql6AIanyXUgtESY,4562
ALLCools/count_matrix/zarr.py,sha256=ro31uKGTVUkd65RPMANA5jS9S0hlVkX1iafzjtW_GD8,1873
ALLCools/dataset/__init__.py,sha256=01B6DgqzQDmSW0GCRaB63NusbxFiRZOLdtPlhmeucs4,41
ALLCools/dataset/dataset.yaml,sha256=MrWSD7ccM5UOudCSjy3H_70nwN41-x_6sxXZt5HnmxM,168
ALLCools/dataset/directory_structure.py,sha256=bNFvANQSwaD_1WWxybKRVxdcfIjNPj0PqhM3QBD1EdQ,2041
ALLCools/dataset/entry_point.py,sha256=RdCPme-2Mjr50r9lma9bSzLDFvrP1tLtLKZJq-II37A,181
ALLCools/dmr/__init__.py,sha256=MlD-klBCwu9QnujXCaf4Snlu-4Gtien1GN6INn69lKU,133
ALLCools/dmr/call_dmr.py,sha256=2afrzT_XGTC2VOiYs6YTDG2DbXiLJoGibi9dTHA2NLc,8795
ALLCools/dmr/call_dmr_baseds.py,sha256=eBde8gXMyDnplmZVS8qrE4eyUm9PkBg3CsS0sROK_8M,6644
ALLCools/dmr/call_dms.py,sha256=hVwTm1UO_dRqAmpr_Iu7KyLp8aq2nJ9Kq1XyhX2YOHY,7321
ALLCools/dmr/call_dms_baseds.py,sha256=wcfcAMRIpWzYF9GG9-SbX2WudVNpJZNF5caT0Je8k7g,8561
ALLCools/dmr/parse_methylpy.py,sha256=5FrT1Zv-S5HAMEZFhuy6SPoOzwe-wZJcCSMnt9ct6Yg,2461
ALLCools/dmr/rms_test.py,sha256=wDKgNdDpk-Ng2gVq_xl347CfIOKWEa5_NrDDvr_JZJs,4503
ALLCools/genomic/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
ALLCools/gtf/Gtf.py,sha256=Wl8E9QnH7hqE82VZsVoNAzvuPCmGKewijaRb3GFhtXk,5639
ALLCools/gtf/__init__.py,sha256=O4deVTSVxUWeVVJFg6TrwylBl76qk5xmboRazZfCH0M,80
ALLCools/gtf/utilities.py,sha256=WHf-bBJMU2zSuyDDn4jvFNvJ92WFam98HvefXT_ITC4,1164
ALLCools/integration/__init__.py,sha256=uXONjP0PuRFTZH6GGs5Gu8Q_aWPyUbXkiaCiNXTOQBI,195
ALLCools/integration/cca.py,sha256=STRFIuI1Gj9OXsxVKHtX-c4cpKPqXoiombRmNx_9-5w,12276
ALLCools/integration/confusion.py,sha256=N35tc9BhfyHMy2Y2OaDgKGoQ6QDfyXcXHQWkulPMyd8,6554
ALLCools/integration/metric.py,sha256=gFXTLLymoRPfIjhuhkirLkIcDz3IXJou_5QMiQeapbQ,9912
ALLCools/integration/seurat_class.py,sha256=0uJZ-LUx3DTqpuzUeJOmvLUjhkw-EfSgOHzc6CQcuFA,32816
ALLCools/jbrowse/__init__.py,sha256=J65TH08P9N5cMzanMk_GGC-86DMSPy-Mi6mTuYdAgh0,4794
ALLCools/mcds/__init__.py,sha256=-IdlXe2fzc521JjtgbB9i38BFsSMtAUlqMYdjYaR4-M,124
ALLCools/mcds/base_ds.py,sha256=V8rW9T5I7USc1ezF97KhoDaY3uKLTyGwftKiIDngGJw,25737
ALLCools/mcds/correlation.py,sha256=bbeOwy6i1k9mLzronoZJld9nnAmBKywQQfv4YDy_gJs,11587
ALLCools/mcds/mcds.py,sha256=No652XTZAKzGgCTdIFin44Wj_NK8_9iXsuiyReu9SVc,57790
ALLCools/mcds/region_ds.py,sha256=rz1FF2cf5x56HBdr2XYH3dK19uAS5xzUsxmlxm9B1wQ,39343
ALLCools/mcds/utilities.py,sha256=tjSFiELBCNIDm-qw2zpO__LvSjPIouct4oDfwN2yI6Q,19345
ALLCools/motif/__init__.py,sha256=LEit0zOPfO-Ybywy_PQMFqzKsDNJ8-c9K_h-XzcwogY,75
ALLCools/motif/motifs.py,sha256=IA91UqQavzNVO9C4er1L0K87ipihcmQjZH-7_v7yaL8,8709
ALLCools/motif/parse_meme.py,sha256=-i5HQMPn03ZX_WOqqMx9Xaqc18tegcnobIAfi288AGI,4260
ALLCools/motif/snakemake.py,sha256=mIu3RDpfT45MFAbpvdqXzI4nvgpTT1yaLI1l9yHbRq0,4864
ALLCools/motif/default_motif_set/JASPAR2018HOCOMOCOv11Jolma2013.meme,sha256=bkGbIIHPd6GmtZickbvV8HFuxgsOHERj3Pdhu-cnr-Y,1614001
ALLCools/motif/default_motif_set/JASPAR2018HOCOMOCOv11Jolma2013.metadata.csv,sha256=lLLxnzecy-q4fjSoDloBG3D1Iqgmj0L9_Z3dcQ7iIjQ,172054
ALLCools/motif/default_motif_set/JASPAR2018HOCOMOCOv11Jolma2013.thresholds.csv,sha256=B414vCkM70K1kuBVdHkn8BSS8EfkZEXlW8IoN5v_Pzw,77918
ALLCools/motif/default_motif_set/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
ALLCools/plot/__init__.py,sha256=lyYopRTxw0cj2HZw5o7gB3J0cV97Mi2fft4fCVZcS_o,306
ALLCools/plot/categorical_scatter.py,sha256=g30J2nsXNp-4MYmwFQBdHv25ZaG5OjXJsQQYn3nSKv0,9026
ALLCools/plot/color.py,sha256=nl1J8efeG1gSRfkS1fYcKu0B90HSNhaX8HRT9rdWDVI,4512
ALLCools/plot/continuous_scatter.py,sha256=i-BPqu_3ivrXTuCiNOKahQG7QTEf4pRUDsYBl-pI_5g,7704
ALLCools/plot/contour.py,sha256=ytV8Q0hc2wYaOiPoAfTMpaJxxom6f40EsGU9QuWa7AU,1429
ALLCools/plot/decomposition.py,sha256=QR2aexuL5DGSyH6on9CuLb7NsPDxRtNIhzYFgEtTuhk,2645
ALLCools/plot/dendro.py,sha256=eMkJNJYOvXTVrWDnBKPa9XwVRwCDAnWCeVUrRbWta4I,7940
ALLCools/plot/interactive_scatter.py,sha256=feIG3WA_33yKT3sE7_K2WhBKMXuUmYuhKfXlSqJ1_Sc,1026
ALLCools/plot/qc_plots.py,sha256=sP9VFhQzyUBgtI_Sp55jJ_ZHxBIpElOK_4uUgk17vy0,7382
ALLCools/plot/size.py,sha256=Tld9q1Ryf0qY8U3XBPKWV8jGAOGtvv4dHFX4PC5lmjI,833
ALLCools/plot/sunburst.py,sha256=M-3DvYU0vp0bG6wnkR3sGV7L180cVzCmpqBZ_FIhif8,7469
ALLCools/plot/text_anno_scatter.py,sha256=8GHpFMaJZz3LlzCKhtjLfEeUB9SdWmDZm1baQu6_zm8,2083
ALLCools/plot/utilities.py,sha256=HuQrJcGz4o8JC1g-1W3FY8FBnEDwBKFA6Tqtgy3WTkQ,7410
ALLCools/plot/genome_track/GtfTrack.py,sha256=7LqD8lPZyF1LiBWuLHovb-wJXpRkZtQaKQwXqm7xOIw,12573
ALLCools/plot/genome_track/HiCMatrixCoolTrack.py,sha256=vxQJHpIJL2EZ15BV3PuiZPIPk1aT1rgkLQD8aHrcr7A,10256
ALLCools/plot/genome_track/__init__.py,sha256=-kc53GBlOUBo_63XwR3dee_t0aiLtXGIXyfEPjP6WBk,55
ALLCools/plot/genome_track/_pygenometrack.py,sha256=9deCvTAOXHrZGqGmlc8JB8nMpn6AHb60sDxlalCLMz8,37598
ALLCools/pseudo_cell/__init__.py,sha256=CP3dMXHkMAp1qRdmy4JTk6djjDHm6nlmcfU75R0ONyA,166
ALLCools/pseudo_cell/pseudo_cell_kmeans.py,sha256=eA-NuMxOZotCv_g-ZoAWYeII4NGeWkOLEzuSbrKUWRo,6211
ALLCools/pseudo_cell/pseudo_cell_knn.py,sha256=QJRN9KLzvCwcgqfz5gyojRTrFMOQTuvLmTxDF-IQ5c8,10950
ALLCools/reptile/__init__.py,sha256=bmifVNRtyP-bzjcs92PkjhP_As26MvtBTwNzW4JLBk8,29
ALLCools/reptile/reptile.py,sha256=jJK0sqFxu8SObrbiD3F3lZTzmXGdxE5JDJwlAP6IQCE,31804
ALLCools/schema/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
ALLCools/schema/mcds_schema.py,sha256=xjSxvRqkCbywdjBOHtR7c72ZKqTlZAFbZG25YQTXqfA,894
allcools-1.0.8.dist-info/entry_points.txt,sha256=-zJ574hAk5y4K8Phy8LZlxhfqhyaRIlLhWSDPvuMA8E,51
allcools-1.0.8.dist-info/LICENSE,sha256=h_rSleR0J045h_BH8hg2ojIPSdH-zeBZIu2LEtwyGlg,1073
allcools-1.0.8.dist-info/WHEEL,sha256=4TfKIB_xu-04bc2iKz6_zFt-gEFEEDU_31HGhqzOCE8,81
allcools-1.0.8.dist-info/METADATA,sha256=nrmwCwe-1mjsA_KOPY_mVYQaduV7_HCjfRgyk0YwEZw,2127
allcools-1.0.8.dist-info/RECORD,,
