README.md
setup.py
aldy/__init__.py
aldy/__main__.py
aldy/cn.py
aldy/common.py
aldy/diplotype.py
aldy/filtering.py
aldy/gene.py
aldy/genotype.py
aldy/lpinterface.py
aldy/protein.py
aldy/refiner.py
aldy/sam.py
aldy/test.py
aldy/version.py
aldy.egg-info/PKG-INFO
aldy.egg-info/SOURCES.txt
aldy.egg-info/dependency_links.txt
aldy.egg-info/entry_points.txt
aldy.egg-info/requires.txt
aldy.egg-info/top_level.txt
aldy/resources/LICENSE.md
aldy/resources/NA10860.bai
aldy/resources/NA10860.bam
aldy/resources/__init__.py
aldy/resources/genes/__init__.py
aldy/resources/genes/cyp2a6.yml
aldy/resources/genes/cyp2c19.yml
aldy/resources/genes/cyp2c8.yml
aldy/resources/genes/cyp2c9.yml
aldy/resources/genes/cyp2d6.yml
aldy/resources/genes/cyp3a4.yml
aldy/resources/genes/cyp3a5.yml
aldy/resources/genes/cyp4f2.yml
aldy/resources/genes/dpyd.yml
aldy/resources/genes/tpmt.yml
aldy/resources/profiles/__init__.py
aldy/resources/profiles/illumina.profile
aldy/resources/profiles/pgrnseq-v1.profile
aldy/resources/profiles/pgrnseq-v2.profile