LICENSE
README.md
pyproject.toml
aldepyde/__init__.py
aldepyde/_config.py
aldepyde/configurable.py
aldepyde/data.py
aldepyde/env.py
aldepyde/utils.py
aldepyde.egg-info/PKG-INFO
aldepyde.egg-info/SOURCES.txt
aldepyde.egg-info/dependency_links.txt
aldepyde.egg-info/top_level.txt
aldepyde/Ops/__init__.py
aldepyde/Ops/residue_ops.py
aldepyde/Parsers/_mmcif_parser.py
aldepyde/Parsers/_pdb_parser.py
aldepyde/analysis/__init__.py
aldepyde/analysis/protein_analysis.py
aldepyde/analysis/sequence/protein_analysis.py
aldepyde/biomolecule/__init__.py
aldepyde/biomolecule/structure.py
aldepyde/biomolecule_old/Residue.py
aldepyde/biomolecule_old/_Atom.py
aldepyde/biomolecule_old/_AtomFactory.py
aldepyde/biomolecule_old/__init__.py
aldepyde/biomolecule_old/_amino_acid.py
aldepyde/biomolecule_old/_dna.py
aldepyde/biomolecule_old/_pdb.py
aldepyde/biomolecule_old/_rna.py
aldepyde/biomolecule_old/utils.py
aldepyde/cache/__init__.py
aldepyde/cache/_cache.py
aldepyde/cache/cachemanager.py
aldepyde/cache/downloader.py
aldepyde/cache/utils.py
aldepyde/data/__init__.py
aldepyde/data/chemistry.json
aldepyde/data/chemistry_old.json
aldepyde/data/chemistry_temp.json
aldepyde/data/data_exceptions.py
aldepyde/data/new_js.json
aldepyde/data/store.py
aldepyde/databases/RemoteFileHandler.py
aldepyde/databases/SCOPe_Astral.py
aldepyde/databases/UniRef.py
aldepyde/databases/__init__.py
aldepyde/databases/_database.py
aldepyde/databases/fasta.py
aldepyde/distribution/__init__.py
aldepyde/distribution/distribution.py
aldepyde/distribution/protein_distribution.py
aldepyde/distribution/distributions/arabidopsis.json
aldepyde/distribution/distributions/bacillus.json
aldepyde/distribution/distributions/drosophila.json
aldepyde/distribution/distributions/ecoli.json
aldepyde/distribution/distributions/human.json
aldepyde/distribution/distributions/mouse.json
aldepyde/distribution/distributions/standards.py
aldepyde/distribution/distributions/swiss.json
aldepyde/distribution/distributions/yeast.json
aldepyde/fetcher/__init__.py
aldepyde/generators/Sequence.py
aldepyde/generators/__init__.py
aldepyde/generators/polymer_constraints.py
aldepyde/generators/polymer_specs.py
aldepyde/generators/protein_constraints.py
aldepyde/generators/protein_generator.py
aldepyde/generators/protein_specs.py
aldepyde/generators/residue_generator.py
aldepyde/generators/defaults/protein_defaults.py
aldepyde/generators/deprecated/RandomProtein.py
aldepyde/generators/deprecated/__init__.py
aldepyde/pdb/__init__.py
aldepyde/pdb/fetch.py
aldepyde/pdb/load.py
aldepyde/pdb/parse.py
aldepyde/pdb/parse_mmcif.py
aldepyde/pdb/parse_pdb.py
aldepyde/pdb/pdb_client.py
aldepyde/pdb/sniff.py
aldepyde/pdb/utils.py
aldepyde/remode_data/RemoteFileHandler.py
aldepyde/remode_data/__init__.py
aldepyde/stats/ProteinStats.py
aldepyde/stats/__init__.py